Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   EL140_RS08430 Genome accession   NZ_LR134336
Coordinates   1699443..1700066 (-) Length   207 a.a.
NCBI ID   WP_000240908.1    Uniprot ID   K1AJV1
Organism   Streptococcus oralis ATCC 35037 strain NCTC 11427     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1694443..1705066
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL140_RS08400 (NCTC11427_01657) - 1694464..1694658 (-) 195 WP_000415528.1 PspC domain-containing protein -
  EL140_RS08405 (NCTC11427_01658) recA 1694828..1695976 (-) 1149 WP_001085515.1 recombinase RecA Machinery gene
  EL140_RS08410 (NCTC11427_01659) cinA 1696031..1697287 (-) 1257 WP_000642669.1 competence/damage-inducible protein A Machinery gene
  EL140_RS08415 (NCTC11427_01660) brpA 1697360..1698400 (-) 1041 WP_000592174.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL140_RS08420 (NCTC11427_01661) - 1698405..1698926 (-) 522 WP_000455521.1 GNAT family N-acetyltransferase -
  EL140_RS08425 (NCTC11427_01662) tsaE 1698916..1699359 (-) 444 WP_000556960.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL140_RS08430 (NCTC11427_01663) comM 1699443..1700066 (-) 624 WP_000240908.1 hypothetical protein Regulator
  EL140_RS08435 (NCTC11427_01664) ndk 1700201..1700620 (-) 420 WP_000438309.1 nucleoside-diphosphate kinase -
  EL140_RS08440 (NCTC11427_01665) rpoC 1700732..1704430 (-) 3699 WP_000228752.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23752.69 Da        Isoelectric Point: 9.2521

>NTDB_id=1121867 EL140_RS08430 WP_000240908.1 1699443..1700066(-) (comM) [Streptococcus oralis ATCC 35037 strain NCTC 11427]
MVKSIRLLLLIAVIQISFSSCLLWKESFLSLKQTNAYFLILIVGISVLCAGINYFHTADQSRHSILHVQKKVSLVYCLLL
VVNLLATCLVLSESIQTTSKLQQELVDLFLPSFFFLLGVDLLIFLPFDKIFRDIENHLNKKKTVVISVLATMVFLRNPLV
ISSIFFYISVGFLCARFLFPKCIQREISFYGHLIRDILFVFSIVVFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=1121867 EL140_RS08430 WP_000240908.1 1699443..1700066(-) (comM) [Streptococcus oralis ATCC 35037 strain NCTC 11427]
ATGGTAAAATCAATTCGCCTATTGTTACTGATTGCAGTCATCCAGATTAGTTTTAGTAGTTGCCTATTATGGAAAGAATC
CTTTTTATCTTTAAAACAGACCAATGCTTACTTTTTGATTTTGATAGTAGGAATTTCTGTTTTGTGCGCTGGGATAAATT
ATTTCCATACAGCAGACCAGTCTAGACATAGTATTTTACATGTTCAAAAGAAAGTGAGCCTTGTTTATTGCCTCCTTTTA
GTAGTCAATCTTCTGGCAACCTGTCTGGTTCTCTCAGAAAGCATCCAAACCACTAGCAAATTGCAGCAGGAACTGGTTGA
CCTCTTTTTACCCTCCTTCTTTTTCTTGCTAGGAGTAGATCTATTGATTTTCTTACCTTTTGATAAAATTTTTCGCGATA
TAGAAAATCACCTAAATAAAAAGAAAACAGTCGTCATTTCCGTTCTAGCTACGATGGTTTTCTTGAGGAATCCCTTAGTG
ATTTCCTCGATTTTCTTTTATATCAGTGTTGGTTTTCTATGCGCACGTTTCCTTTTTCCCAAATGTATCCAAAGGGAAAT
CTCCTTTTATGGGCACCTGATTCGGGATATCCTGTTTGTTTTTTCAATAGTTGTATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB K1AJV1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

50.971

99.517

0.507
  comM Streptococcus pneumoniae R6

50.971

99.517

0.507
  comM Streptococcus pneumoniae TIGR4

50.971

99.517

0.507
  comM Streptococcus mitis NCTC 12261

41.117

95.169

0.391
  comM Streptococcus mitis SK321

41.117

95.169

0.391

Multiple sequence alignment