Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   EL133_RS07725 Genome accession   NZ_LR134323
Coordinates   1512538..1513539 (-) Length   333 a.a.
NCBI ID   WP_006739678.1    Uniprot ID   G5KIC9
Organism   Streptococcus urinalis strain NCTC13766     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1507538..1518539
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL133_RS07710 (NCTC13766_01601) - 1508624..1509961 (-) 1338 WP_006739752.1 glycosyltransferase family 4 protein -
  EL133_RS07715 (NCTC13766_01602) - 1509963..1510961 (-) 999 WP_006738463.1 glycosyltransferase -
  EL133_RS07720 (NCTC13766_01603) - 1511049..1512500 (-) 1452 WP_006738919.1 alpha-amylase -
  EL133_RS07725 (NCTC13766_01604) ccpA 1512538..1513539 (-) 1002 WP_006739678.1 catabolite control protein A Regulator
  EL133_RS07730 (NCTC13766_01605) deoC 1513773..1514444 (-) 672 WP_006740241.1 deoxyribose-phosphate aldolase -
  EL133_RS07735 (NCTC13766_01606) - 1514473..1515675 (-) 1203 WP_006740491.1 NupC/NupG family nucleoside CNT transporter -
  EL133_RS07740 (NCTC13766_01607) udp 1515698..1516477 (-) 780 WP_006738821.1 uridine phosphorylase -
  EL133_RS07745 (NCTC13766_01608) - 1516643..1517401 (+) 759 WP_006738609.1 GntR family transcriptional regulator -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36855.11 Da        Isoelectric Point: 5.7694

>NTDB_id=1121542 EL133_RS07725 WP_006739678.1 1512538..1513539(-) (ccpA) [Streptococcus urinalis strain NCTC13766]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNIANNYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKAAVIDVVNILAENHKQIAYISGPLIDDINGKVRLVGYKEGLKQNKLDFKEGLVFEANYSYKEGFDLAQRVINSG
ATAAYVAEDELAAGLLNGLFELGKKVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1121542 EL133_RS07725 WP_006739678.1 1512538..1513539(-) (ccpA) [Streptococcus urinalis strain NCTC13766]
ATGAATACTGATGACACTATCACGATATATGATGTTGCCCGTGAAGCTGGTGTTTCAATGGCAACCGTTAGTCGCGTTGT
CAATGGCAATAAAAATGTAAAGGAAAATACACGAAAAAAAGTTCTTGAAGTAATTGAACGTTTAGACTATAGACCAAATG
CAGTTGCGCGTGGACTAGCAAGTAAGAAGACAACGACTGTTGGTGTTGTTATTCCAAATATCGCTAATAACTATTTTTCA
ATCTTAGCTAAAGGAATTGACGATATCGCTGCAATGTACAAATACAACATTGTTTTAGCTTCAAGTGATGAAGATGATGA
CAAAGAAGTCAATGTTGTCAATACACTGTTTGCAAAGCAAGTAGATGGTATCATTTTTATGGGACACCATTTAACTGAAA
AAATTCGTGCTGAATTTTCCCGCTCAAGAACACCAATTGTCTTAGCTGGTACTGTTGACTTAGAACATCAACTGCCAAGT
GTAAATATTGATTACAAAGCAGCAGTCATTGACGTGGTTAATATTTTAGCTGAAAACCATAAGCAAATTGCTTATATTTC
AGGACCATTAATTGACGATATCAATGGTAAAGTTCGCCTCGTTGGCTACAAAGAAGGACTAAAGCAAAATAAATTAGACT
TCAAAGAAGGCCTTGTTTTTGAAGCTAATTATAGCTATAAAGAAGGTTTTGATTTAGCTCAACGTGTTATTAATTCAGGG
GCAACAGCAGCTTATGTTGCTGAAGATGAATTGGCGGCTGGACTTTTAAATGGCTTATTTGAATTAGGCAAAAAAGTTCC
TGAAGATTTTGAAATCATTACAAGTAATGATTCACCAGTTGTTCAGTACACAAGGCCTAACTTATCTTCTATCAGTCAAC
CTGTTTATGATTTAGGAGCTGTCAGCATGCGCATGCTAACTAAAATCATGAATAAAGAAGAGCTAGAAGAAAAAGAAATA
TTACTCAACCATGGTATCAAAAAACGTGGTACAACTAAGTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5KIC9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.276

100

0.763
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.798

99.399

0.565

Multiple sequence alignment