Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   EL133_RS01575 Genome accession   NZ_LR134323
Coordinates   308711..309745 (+) Length   344 a.a.
NCBI ID   WP_006739268.1    Uniprot ID   G5KI68
Organism   Streptococcus urinalis strain NCTC13766     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 303711..314745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL133_RS01535 (NCTC13766_00307) tsaE 303995..304441 (+) 447 WP_006738528.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL133_RS01540 (NCTC13766_00308) - 304428..304949 (+) 522 WP_006739266.1 GNAT family N-acetyltransferase -
  EL133_RS01545 (NCTC13766_00309) brpA 304957..306201 (+) 1245 WP_006738665.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL133_RS01550 (NCTC13766_00310) - 306228..306524 (-) 297 WP_006740495.1 hypothetical protein -
  EL133_RS01555 (NCTC13766_00311) - 306524..306940 (-) 417 WP_006740020.1 HIT family protein -
  EL133_RS01560 (NCTC13766_00312) - 307108..307870 (+) 763 Protein_301 (S)-acetoin forming diacetyl reductase -
  EL133_RS01570 (NCTC13766_00314) pptA 307983..308714 (+) 732 WP_006739566.1 ABC transporter ATP-binding protein Regulator
  EL133_RS01575 (NCTC13766_00315) pptB 308711..309745 (+) 1035 WP_006739268.1 ABC transporter permease Regulator
  EL133_RS01580 (NCTC13766_00316) ccrZ 309802..310593 (+) 792 WP_006738655.1 cell cycle regulator CcrZ -
  EL133_RS01585 (NCTC13766_00317) trmB 310593..311228 (+) 636 WP_006740452.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40767.74 Da        Isoelectric Point: 10.6554

>NTDB_id=1121511 EL133_RS01575 WP_006739268.1 308711..309745(+) (pptB) [Streptococcus urinalis strain NCTC13766]
MRTIFSKRRDQFQTQLLKYSRYVLNDHFVLVLLFLMGFILVQYSQLLRHFPKNHWPIIIIILMIIVFLLSLGKIATYVEN
PDKLFLLTKEKEILKEVNQATKRAYIWQFILQTTVMVLFLPIFLKLGLNIYVFVILLCFMAIIKYLLIQKEQAILIANHT
LKWSKAIEYEANRKQIILKFFSLFTTVKGVTTSVKRRAYLDWVLKYIKKSKSSMWKNLYIRAFLRSSDYFGLTIRLLILS
LLSILVINNHIIAGVLVIIFNYLLLFQLLPLFNHFDYSLMNKLMPVSKQLKVANLKQFLNRLFGIIVIVESLFSLNFLTI
FIIVIGYIMTMFVYLPYKLKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=1121511 EL133_RS01575 WP_006739268.1 308711..309745(+) (pptB) [Streptococcus urinalis strain NCTC13766]
ATGAGAACAATCTTCTCTAAAAGACGTGACCAATTTCAAACACAATTACTCAAATATTCTCGTTATGTTTTAAATGATCA
CTTTGTACTTGTCTTGCTTTTTTTAATGGGATTTATACTCGTTCAATACAGCCAGTTGTTGCGTCATTTTCCAAAAAATC
ACTGGCCAATTATAATAATTATTTTGATGATTATTGTGTTTTTGTTAAGTTTAGGAAAAATAGCGACTTACGTTGAAAAT
CCAGATAAATTATTTTTACTAACTAAAGAAAAGGAAATTTTAAAAGAAGTAAATCAAGCTACAAAGAGAGCTTATATTTG
GCAATTTATTCTCCAAACAACAGTTATGGTCTTGTTTTTGCCTATTTTTCTAAAGCTTGGCTTGAATATATATGTGTTTG
TGATTCTTTTATGTTTTATGGCTATCATTAAATACCTTCTGATTCAAAAAGAACAAGCTATTTTGATTGCTAATCATACT
CTAAAATGGAGTAAGGCGATAGAATATGAAGCAAATCGAAAACAAATTATTTTAAAATTTTTTTCACTATTTACGACTGT
TAAGGGTGTGACCACTTCAGTAAAAAGAAGAGCATATTTGGACTGGGTTTTAAAATATATAAAAAAATCAAAAAGTAGTA
TGTGGAAAAATCTTTATATCAGAGCATTTTTGAGAAGCTCAGATTATTTTGGGTTAACGATTCGTCTATTGATATTGAGT
TTATTGTCTATTTTAGTGATTAATAATCATATAATTGCGGGAGTATTAGTGATTATATTTAATTATCTCTTGCTATTTCA
ACTGTTGCCGCTCTTTAATCATTTTGATTATAGTCTGATGAATAAGTTAATGCCAGTTTCTAAACAACTAAAAGTAGCTA
ATCTAAAGCAATTTCTAAATAGACTATTTGGGATTATAGTTATAGTAGAATCCTTATTTAGTCTTAACTTTTTGACAATT
TTTATTATCGTAATAGGCTATATTATGACGATGTTTGTTTACCTACCATACAAACTAAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G5KI68

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

50.144

100

0.506

  pptB Streptococcus thermophilus LMD-9

50

100

0.503


Multiple sequence alignment