Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EL133_RS01570 Genome accession   NZ_LR134323
Coordinates   307983..308714 (+) Length   243 a.a.
NCBI ID   WP_006739566.1    Uniprot ID   G5KI67
Organism   Streptococcus urinalis strain NCTC13766     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 302983..313714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL133_RS01530 (NCTC13766_00306) - 303592..303780 (-) 189 WP_006738941.1 hypothetical protein -
  EL133_RS01535 (NCTC13766_00307) tsaE 303995..304441 (+) 447 WP_006738528.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL133_RS01540 (NCTC13766_00308) - 304428..304949 (+) 522 WP_006739266.1 GNAT family N-acetyltransferase -
  EL133_RS01545 (NCTC13766_00309) brpA 304957..306201 (+) 1245 WP_006738665.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL133_RS01550 (NCTC13766_00310) - 306228..306524 (-) 297 WP_006740495.1 hypothetical protein -
  EL133_RS01555 (NCTC13766_00311) - 306524..306940 (-) 417 WP_006740020.1 HIT family protein -
  EL133_RS01560 (NCTC13766_00312) - 307108..307870 (+) 763 Protein_301 (S)-acetoin forming diacetyl reductase -
  EL133_RS01570 (NCTC13766_00314) pptA 307983..308714 (+) 732 WP_006739566.1 ABC transporter ATP-binding protein Regulator
  EL133_RS01575 (NCTC13766_00315) pptB 308711..309745 (+) 1035 WP_006739268.1 ABC transporter permease Regulator
  EL133_RS01580 (NCTC13766_00316) ccrZ 309802..310593 (+) 792 WP_006738655.1 cell cycle regulator CcrZ -
  EL133_RS01585 (NCTC13766_00317) trmB 310593..311228 (+) 636 WP_006740452.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27109.47 Da        Isoelectric Point: 4.7119

>NTDB_id=1121510 EL133_RS01570 WP_006739566.1 307983..308714(+) (pptA) [Streptococcus urinalis strain NCTC13766]
MLKIENLTGGYINIPVLKNISFSVNDGELVGLIGLNGAGKSTTINEIIGLLTPYQGQITIDELSLSKDESAYRQKIGYIP
ETPNLYEELTLREHIEVVAMAYDLEPDIAMKRAKQLLQTFRLSDKLDWFPVNFSKGMKQKVMIVCAFIVDPSLFIIDEPF
LGLDPLAISDLTKLLAEEKAKGKSILMSTHVLDSAEKMCDKFVVLHHGEIRAAGTLEQLREEFSSPKASLSDIYVMLTRE
VSE

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1121510 EL133_RS01570 WP_006739566.1 307983..308714(+) (pptA) [Streptococcus urinalis strain NCTC13766]
ATGTTAAAAATTGAGAATCTTACAGGTGGTTATATCAATATCCCTGTTTTAAAAAATATTTCGTTTTCTGTAAATGATGG
AGAGTTGGTTGGTCTAATCGGTTTAAATGGCGCTGGAAAATCAACGACGATTAATGAGATAATTGGGCTTCTCACACCTT
ATCAAGGTCAAATCACAATTGATGAACTAAGCTTATCCAAAGATGAGTCAGCCTATCGACAAAAAATTGGTTATATTCCA
GAGACGCCAAATTTATACGAGGAGTTGACCTTACGTGAACATATAGAAGTAGTAGCAATGGCTTATGATCTTGAACCTGA
CATTGCGATGAAAAGAGCAAAACAGTTATTGCAAACTTTTAGACTATCAGATAAATTGGATTGGTTTCCTGTAAACTTCT
CAAAAGGGATGAAACAGAAAGTCATGATTGTATGTGCATTTATTGTAGATCCAAGTTTATTTATTATTGATGAACCATTT
TTAGGCTTAGATCCTCTGGCTATTTCTGATTTGACAAAACTATTAGCAGAAGAAAAAGCAAAAGGAAAGTCAATTCTAAT
GAGTACACATGTATTAGATTCTGCTGAAAAAATGTGTGATAAATTTGTTGTTCTACATCACGGCGAGATACGTGCAGCCG
GAACACTAGAGCAATTGAGAGAAGAATTTTCTAGTCCAAAAGCAAGTTTGAGTGATATATATGTAATGTTAACTCGTGAG
GTGAGCGAATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5KI67

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.059

98.354

0.728
  pptA Streptococcus thermophilus LMD-9

73.64

98.354

0.724

Multiple sequence alignment