Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   EL130_RS09220 Genome accession   NZ_LR134320
Coordinates   1850442..1851443 (-) Length   333 a.a.
NCBI ID   WP_002264971.1    Uniprot ID   -
Organism   Streptococcus mutans strain NCTC10832     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1845442..1856443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL130_RS09200 - 1845484..1846125 (-) 642 WP_126475568.1 AAA family ATPase -
  EL130_RS10205 - 1846119..1846311 (-) 193 Protein_1720 hypothetical protein -
  EL130_RS09205 (NCTC10832_01803) - 1846390..1847724 (-) 1335 WP_002262800.1 glycosyltransferase family 4 protein -
  EL130_RS09210 (NCTC10832_01804) - 1847726..1848724 (-) 999 WP_002271827.1 glycosyltransferase -
  EL130_RS09215 (NCTC10832_01805) - 1848834..1850294 (-) 1461 WP_002288224.1 alpha-amylase -
  EL130_RS09220 (NCTC10832_01806) ccpA 1850442..1851443 (-) 1002 WP_002264971.1 catabolite control protein A Regulator
  EL130_RS09225 (NCTC10832_01807) - 1851606..1852685 (+) 1080 WP_002288222.1 M24 family metallopeptidase -
  EL130_RS09230 (NCTC10832_01808) - 1852801..1853382 (-) 582 WP_002262795.1 CDP-archaeol synthase -
  EL130_RS09235 (NCTC10832_01809) - 1853509..1854009 (-) 501 Protein_1727 carbonic anhydrase -
  EL130_RS10365 - 1853976..1854221 (-) 246 WP_002288220.1 hypothetical protein -
  EL130_RS09240 (NCTC10832_01810) - 1854315..1854980 (+) 666 WP_002288218.1 NAD(P)H-dependent oxidoreductase -
  EL130_RS09245 (NCTC10832_01811) - 1855016..1855408 (+) 393 WP_002288216.1 VOC family protein -
  EL130_RS09250 (NCTC10832_01812) smpB 1855462..1855929 (-) 468 WP_002309134.1 SsrA-binding protein SmpB -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36647.91 Da        Isoelectric Point: 6.8583

>NTDB_id=1121447 EL130_RS09220 WP_002264971.1 1850442..1851443(-) (ccpA) [Streptococcus mutans strain NCTC10832]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPFIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1121447 EL130_RS09220 WP_002264971.1 1850442..1851443(-) (ccpA) [Streptococcus mutans strain NCTC10832]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAATATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAGT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCTTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTGCTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGACTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

75.676

100

0.757

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553


Multiple sequence alignment