Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   EL130_RS03880 Genome accession   NZ_LR134320
Coordinates   751876..752910 (+) Length   344 a.a.
NCBI ID   WP_002262607.1    Uniprot ID   A0A829BMK9
Organism   Streptococcus mutans strain NCTC10832     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 746876..757910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL130_RS03855 (NCTC10832_00730) tsaE 748233..748676 (+) 444 WP_002265162.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL130_RS03860 (NCTC10832_00731) brpA 749005..750204 (+) 1200 WP_002283947.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL130_RS03865 (NCTC10832_00732) - 750374..750667 (-) 294 WP_002269513.1 hypothetical protein -
  EL130_RS03870 (NCTC10832_00733) - 750664..751083 (-) 420 WP_002262609.1 HIT family protein -
  EL130_RS03875 (NCTC10832_00734) pptA 751148..751873 (+) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  EL130_RS03880 (NCTC10832_00735) pptB 751876..752910 (+) 1035 WP_002262607.1 ABC transporter permease Regulator
  EL130_RS03885 (NCTC10832_00736) ccrZ 752969..753751 (+) 783 WP_002262606.1 cell cycle regulator CcrZ -
  EL130_RS03890 (NCTC10832_00737) trmB 753761..754396 (+) 636 WP_002262605.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL130_RS03900 (NCTC10832_00739) rimP 754668..755159 (+) 492 WP_002267543.1 ribosome maturation factor RimP -
  EL130_RS03905 (NCTC10832_00740) nusA 755195..756388 (+) 1194 WP_002262603.1 transcription termination factor NusA -
  EL130_RS03910 (NCTC10832_00741) rnpM 756406..756702 (+) 297 WP_002263922.1 RNase P modulator RnpM -
  EL130_RS03915 (NCTC10832_00742) - 756695..756997 (+) 303 WP_002262601.1 YlxQ-related RNA-binding protein -
  EL130_RS10465 - 757018..757113 (+) 96 Protein_694 translation initiation factor IF-2 N-terminal domain-containing protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40584.03 Da        Isoelectric Point: 10.6270

>NTDB_id=1121419 EL130_RS03880 WP_002262607.1 751876..752910(+) (pptB) [Streptococcus mutans strain NCTC10832]
MKAIFTKRRFHFINQCSRYLRYVFNDHFVLVLIFLLGFLMVQYSQLLKHFPANHWPIMLVLVLVVLTLLFWGNIATYLEP
ADQQFLLVREKDIVALIQKAKRRALFFWGTWQTLLLLILAPLFLRLGLALFSFLFLLLFLLFLKGLIIEKKSRAFLKQKG
LNWDHALNQEKKRQQAILKFFSLFTNVKGISNSVKRRAYLDFGTKLLPKKTHKAWTNLYLRAFLRSGDYLGLTFRLGFLS
LLSLLFIDNPLMSAGLALLFNYLLLFQLLALYKHYDYQYLTALFPVSKAEKEANLKQLLRVILYFLTAVEFCFSFSWQKT
IILLLAMLCLNEVYLPYKIKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=1121419 EL130_RS03880 WP_002262607.1 751876..752910(+) (pptB) [Streptococcus mutans strain NCTC10832]
ATGAAGGCAATTTTTACAAAAAGACGATTCCATTTTATCAATCAATGCAGTCGATACCTTCGCTATGTTTTTAATGATCA
TTTTGTTTTAGTATTGATTTTTTTACTAGGTTTTCTTATGGTACAGTATAGTCAACTGTTAAAACATTTTCCGGCTAATC
ATTGGCCTATCATGCTTGTTTTAGTGTTAGTTGTCTTGACCTTACTATTTTGGGGAAATATAGCGACTTATTTGGAACCA
GCGGATCAGCAATTTCTTTTGGTCAGGGAAAAGGACATTGTTGCTTTAATCCAAAAAGCTAAAAGACGAGCTCTTTTCTT
TTGGGGAACTTGGCAGACACTCTTGCTTCTTATTTTGGCACCTCTTTTTTTACGTTTGGGACTGGCACTTTTTTCTTTTC
TTTTTTTGCTCCTTTTTTTGCTCTTTTTAAAAGGATTGATCATTGAAAAAAAAAGCAGAGCTTTTTTGAAGCAGAAAGGA
CTGAACTGGGATCATGCTCTTAATCAAGAGAAAAAGCGGCAGCAGGCAATTTTAAAATTCTTTTCACTTTTTACCAATGT
TAAGGGAATTTCAAACAGCGTTAAGCGACGGGCTTATTTGGATTTTGGGACAAAATTATTGCCGAAGAAGACTCATAAAG
CATGGACTAATCTTTATTTAAGAGCTTTTTTACGCAGTGGCGATTATTTAGGACTGACCTTTCGTTTAGGTTTTTTAAGC
CTTTTAAGTCTTCTTTTTATTGATAATCCTTTAATGTCAGCAGGTTTAGCGCTCCTTTTTAATTACCTCTTGCTTTTTCA
ATTGTTGGCTCTTTATAAACATTATGATTATCAATATTTAACAGCCCTTTTTCCCGTTTCAAAAGCGGAGAAGGAGGCTA
ATTTGAAACAGTTATTGCGTGTTATTCTATATTTTCTAACAGCTGTTGAATTTTGTTTTAGCTTTTCATGGCAAAAGACA
ATTATTTTACTTTTGGCAATGCTTTGTCTCAATGAAGTTTATCTGCCTTACAAAATAAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A829BMK9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

51.744

100

0.517

  pptB Streptococcus thermophilus LMD-9

50.581

100

0.506


Multiple sequence alignment