Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EL130_RS03875 Genome accession   NZ_LR134320
Coordinates   751148..751873 (+) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans strain NCTC10832     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 746148..756873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL130_RS03850 (NCTC10832_00729) - 746674..748104 (+) 1431 WP_002296285.1 NCS2 family permease -
  EL130_RS03855 (NCTC10832_00730) tsaE 748233..748676 (+) 444 WP_002265162.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL130_RS03860 (NCTC10832_00731) brpA 749005..750204 (+) 1200 WP_002283947.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL130_RS03865 (NCTC10832_00732) - 750374..750667 (-) 294 WP_002269513.1 hypothetical protein -
  EL130_RS03870 (NCTC10832_00733) - 750664..751083 (-) 420 WP_002262609.1 HIT family protein -
  EL130_RS03875 (NCTC10832_00734) pptA 751148..751873 (+) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  EL130_RS03880 (NCTC10832_00735) pptB 751876..752910 (+) 1035 WP_002262607.1 ABC transporter permease Regulator
  EL130_RS03885 (NCTC10832_00736) ccrZ 752969..753751 (+) 783 WP_002262606.1 cell cycle regulator CcrZ -
  EL130_RS03890 (NCTC10832_00737) trmB 753761..754396 (+) 636 WP_002262605.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL130_RS03900 (NCTC10832_00739) rimP 754668..755159 (+) 492 WP_002267543.1 ribosome maturation factor RimP -
  EL130_RS03905 (NCTC10832_00740) nusA 755195..756388 (+) 1194 WP_002262603.1 transcription termination factor NusA -
  EL130_RS03910 (NCTC10832_00741) rnpM 756406..756702 (+) 297 WP_002263922.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=1121418 EL130_RS03875 WP_002262608.1 751148..751873(+) (pptA) [Streptococcus mutans strain NCTC10832]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1121418 EL130_RS03875 WP_002262608.1 751148..751873(+) (pptA) [Streptococcus mutans strain NCTC10832]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACGCCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAGATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCTTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759

Multiple sequence alignment