Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EL136_RS07390 | Genome accession | NZ_LR134317 |
| Coordinates | 1556385..1556873 (-) | Length | 162 a.a. |
| NCBI ID | WP_154804125.1 | Uniprot ID | A0A7Z8ZW24 |
| Organism | Streptococcus equi subsp. zooepidemicus strain NCTC6180 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1551385..1561873
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL136_RS07370 (NCTC6180_01510) | - | 1553873..1554817 (+) | 945 | WP_154804124.1 | magnesium transporter CorA family protein | - |
| EL136_RS07375 | - | 1554842..1555024 (-) | 183 | WP_042670070.1 | hypothetical protein | - |
| EL136_RS07380 (NCTC6180_01511) | - | 1555079..1555729 (+) | 651 | WP_021320374.1 | DUF1129 domain-containing protein | - |
| EL136_RS07385 (NCTC6180_01512) | rpsR | 1555987..1556226 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| EL136_RS07390 (NCTC6180_01513) | ssb | 1556385..1556873 (-) | 489 | WP_154804125.1 | single-stranded DNA-binding protein | Machinery gene |
| EL136_RS07395 (NCTC6180_01514) | rpsF | 1556892..1557182 (-) | 291 | WP_012678504.1 | 30S ribosomal protein S6 | - |
| EL136_RS07400 (NCTC6180_01515) | - | 1557471..1558727 (+) | 1257 | WP_115266875.1 | ISL3 family transposase | - |
| EL136_RS11005 (NCTC6180_01516) | - | 1559662..1559887 (-) | 226 | Protein_1473 | HicB family protein | - |
| EL136_RS07405 (NCTC6180_01517) | mutY | 1559976..1561124 (+) | 1149 | WP_154804126.1 | A/G-specific adenine glycosylase | - |
Sequence
Protein
Download Length: 162 a.a. Molecular weight: 17812.62 Da Isoelectric Point: 4.9008
>NTDB_id=1121283 EL136_RS07390 WP_154804125.1 1556385..1556873(-) (ssb) [Streptococcus equi subsp. zooepidemicus strain NCTC6180]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREANSSGSYGGGFNSSSATNSYSAPAQQTPNFGRDESPFGGSNPMDISDDDL
PF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREANSSGSYGGGFNSSSATNSYSAPAQQTPNFGRDESPFGGSNPMDISDDDL
PF
Nucleotide
Download Length: 489 bp
>NTDB_id=1121283 EL136_RS07390 WP_154804125.1 1556385..1556873(-) (ssb) [Streptococcus equi subsp. zooepidemicus strain NCTC6180]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGACGCAGAGCTTCGATACACTCCAAGTCAGGTGGCAGTTGC
TACGTTTACACTTGCTGTTAATCGCGCCTTTAAGAGCCAAAATGGTGAGCGCGAAGCGGATTTCATTAACTGTGTGATCT
GGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAGGGTGCCTTGATTGGGATTACGGGACGTATTCAGACTCGT
AACTACGAAAACCAACAGGGACAGCGTGTGTATGTAACCGAGGTTGTTGCAGATAATTTCCAAATGCTGGAAAGTCGTGC
TACACGTGAGGCGAACTCGTCTGGCTCATATGGTGGTGGTTTTAATAGCTCATCGGCAACCAATAGTTATTCAGCGCCTG
CTCAGCAAACACCTAACTTTGGCAGAGATGAAAGTCCATTTGGCGGCTCAAATCCAATGGATATTTCAGATGACGATCTT
CCATTCTAA
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGACGCAGAGCTTCGATACACTCCAAGTCAGGTGGCAGTTGC
TACGTTTACACTTGCTGTTAATCGCGCCTTTAAGAGCCAAAATGGTGAGCGCGAAGCGGATTTCATTAACTGTGTGATCT
GGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAGGGTGCCTTGATTGGGATTACGGGACGTATTCAGACTCGT
AACTACGAAAACCAACAGGGACAGCGTGTGTATGTAACCGAGGTTGTTGCAGATAATTTCCAAATGCTGGAAAGTCGTGC
TACACGTGAGGCGAACTCGTCTGGCTCATATGGTGGTGGTTTTAATAGCTCATCGGCAACCAATAGTTATTCAGCGCCTG
CTCAGCAAACACCTAACTTTGGCAGAGATGAAAGTCCATTTGGCGGCTCAAATCCAATGGATATTTCAGATGACGATCTT
CCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
57.895 |
100 |
0.611 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
52.747 |
100 |
0.593 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
54.955 |
68.519 |
0.377 |