Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   EL136_RS01515 Genome accession   NZ_LR134317
Coordinates   304734..305735 (+) Length   333 a.a.
NCBI ID   WP_012677612.1    Uniprot ID   A0A6M1KZY1
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC6180     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 299734..310735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL136_RS01490 (NCTC6180_00305) smpB 300643..301110 (+) 468 WP_037581556.1 SsrA-binding protein SmpB -
  EL136_RS01500 (NCTC6180_00306) - 301396..302322 (-) 927 WP_043029953.1 glycosyltransferase family 2 protein -
  EL136_RS01505 (NCTC6180_00307) - 302437..303105 (-) 669 WP_154803655.1 NAD(P)H-dependent oxidoreductase -
  EL136_RS01510 (NCTC6180_00308) - 303475..304560 (-) 1086 WP_038674132.1 M24 family metallopeptidase -
  EL136_RS01515 (NCTC6180_00309) ccpA 304734..305735 (+) 1002 WP_012677612.1 catabolite control protein A Regulator
  EL136_RS01520 (NCTC6180_00310) - 305805..307280 (+) 1476 WP_154803656.1 alpha-amylase -
  EL136_RS01525 (NCTC6180_00311) - 307576..308574 (+) 999 WP_154803657.1 glycosyltransferase family 4 protein -
  EL136_RS01530 (NCTC6180_00312) - 308576..309910 (+) 1335 WP_043052263.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36617.72 Da        Isoelectric Point: 5.7618

>NTDB_id=1121260 EL136_RS01515 WP_012677612.1 304734..305735(+) (ccpA) [Streptococcus equi subsp. zooepidemicus strain NCTC6180]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFDLAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1121260 EL136_RS01515 WP_012677612.1 304734..305735(+) (ccpA) [Streptococcus equi subsp. zooepidemicus strain NCTC6180]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAATGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTTGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATCCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATCGTTCTTGCTTCAAGCGATGAGGACGACGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTTGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGTGCAGAGTTTTCTCGTTCGCGTACGCCAATTGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGACATTTTAGCTAAAGACCACCAAAGCATTGCCTTTGTTTC
AGGGCCGCTCATTGATGATATCAATGGAAAGGTGCGTTTGGCTGGCTACAAGGACGGACTCAAGAAGAACAAGCTTGATT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCCTATAAGGAAGGCTTTGATTTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGCAAGCGTGTTCC
AGAGGACTTTGAGATTATTACAAGCAATGATTCTCCAGTCGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGTCAGC
CAGTCTATGACTTGGGTGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6M1KZY1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547

Multiple sequence alignment