Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EL115_RS05570 Genome accession   NZ_LR134307
Coordinates   1110295..1111098 (-) Length   267 a.a.
NCBI ID   WP_039677204.1    Uniprot ID   A0A7G9AWZ8
Organism   Streptococcus milleri strain NCTC10708     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1105295..1116098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL115_RS05555 (NCTC10708_01107) smc 1105590..1109123 (-) 3534 WP_126441470.1 chromosome segregation protein SMC -
  EL115_RS05560 (NCTC10708_01108) rnc 1109114..1109812 (-) 699 WP_126441471.1 ribonuclease III -
  EL115_RS09735 - 1109948..1110261 (-) 314 Protein_1063 DUF454 family protein -
  EL115_RS05570 (NCTC10708_01109) vicX 1110295..1111098 (-) 804 WP_039677204.1 MBL fold metallo-hydrolase Regulator
  EL115_RS05575 (NCTC10708_01110) micB 1111100..1112452 (-) 1353 WP_037596825.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EL115_RS05580 (NCTC10708_01111) micA 1112445..1113146 (-) 702 WP_003035055.1 response regulator YycF Regulator
  EL115_RS05585 (NCTC10708_01112) - 1113447..1113779 (-) 333 WP_006268722.1 hypothetical protein -
  EL115_RS05590 (NCTC10708_01113) - 1113806..1115119 (-) 1314 WP_126441472.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29880.74 Da        Isoelectric Point: 5.8744

>NTDB_id=1120891 EL115_RS05570 WP_039677204.1 1110295..1111098(-) (vicX) [Streptococcus milleri strain NCTC10708]
MNEKGFKYSILASGSTGNCFYLETPKKKLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQDTWNAMETALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRIAGII
ENADGYLIESNHDIETLRSGTYPWSLKQRILSDQGHLSNDDGAETMIRTLGIRTKKIYLGHLSKENNTKELAHITMVNQL
AQADLAVEHDFHIYDTSPDTATPLTDI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1120891 EL115_RS05570 WP_039677204.1 1110295..1111098(-) (vicX) [Streptococcus milleri strain NCTC10708]
ATGAACGAGAAGGGATTTAAGTACAGTATTTTAGCGTCAGGTTCTACTGGCAATTGTTTCTATTTAGAAACCCCAAAGAA
GAAGTTGCTGATTGACGCCGGCTTATCTGGAAAGAAAATTACCAGTTTGCTGAGTGAAATTGATCGTAAGCCAGAGGATT
TGGATGCTATTTTGGTGACGCATGAACATAAAGACCATATTCATGGTGTGGGTGTTTTAGCACGGAAATATCATTTAGAT
ATTTATGCTAATCAAGATACTTGGAATGCTATGGAAACAGCACTTGGAAAGATTGATGTCAGTCAGAAGCATATTTTTGA
AATGGGAAAAACGAAAACATTTGGTGATATTGATATTGAAAGTTTTGGAGTCAGTCATGATGCGGTTGCACCACAATTCT
ATCGATTGATGAAAGATGACAAAAGTTTTGTTTTGCTGACGGACACTGGTTATGTCAGCGATCGGATAGCAGGAATCATT
GAAAATGCAGATGGCTATTTGATTGAATCAAATCATGATATTGAAACCCTGCGCAGTGGTACTTATCCTTGGAGTTTAAA
GCAGAGAATTTTGTCTGATCAAGGGCATTTGTCGAATGATGATGGTGCTGAAACTATGATTCGCACTCTAGGGATACGGA
CAAAGAAAATCTATCTAGGACATCTCAGCAAGGAAAATAATACTAAAGAATTGGCTCATATTACAATGGTCAATCAATTG
GCACAGGCTGATTTGGCAGTTGAGCATGATTTTCACATTTATGACACCTCACCAGATACGGCAACTCCATTGACTGATAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G9AWZ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.273

100

0.813

Multiple sequence alignment