Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | EL116_RS07945 | Genome accession | NZ_LR134304 |
| Coordinates | 1623055..1623354 (-) | Length | 99 a.a. |
| NCBI ID | WP_047532015.1 | Uniprot ID | A0A2K4AGD7 |
| Organism | Staphylococcus schweitzeri strain NCTC13712 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1618055..1628354
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL116_RS07920 (NCTC13712_01534) | gcvPA | 1619268..1620614 (-) | 1347 | WP_047425698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| EL116_RS07925 (NCTC13712_01535) | gcvT | 1620633..1621724 (-) | 1092 | WP_047532011.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| EL116_RS07930 | - | 1621881..1622405 (-) | 525 | WP_047549198.1 | shikimate kinase | - |
| EL116_RS07935 | - | 1622392..1622541 (-) | 150 | WP_078101697.1 | hypothetical protein | - |
| EL116_RS07940 (NCTC13712_01537) | comGF | 1622640..1623095 (-) | 456 | WP_078101690.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EL116_RS07945 (NCTC13712_01538) | comGE | 1623055..1623354 (-) | 300 | WP_047532015.1 | hypothetical protein | Machinery gene |
| EL116_RS07950 (NCTC13712_01539) | comGD | 1623341..1623787 (-) | 447 | WP_078101689.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EL116_RS07955 (NCTC13712_01540) | comGC | 1623765..1624076 (-) | 312 | WP_047532019.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EL116_RS07960 (NCTC13712_01541) | comGB | 1624090..1625160 (-) | 1071 | WP_047532021.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EL116_RS07965 (NCTC13712_01542) | comGA | 1625132..1626106 (-) | 975 | WP_047425712.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EL116_RS07970 (NCTC13712_01543) | - | 1626158..1626781 (-) | 624 | WP_047549195.1 | MBL fold metallo-hydrolase | - |
| EL116_RS07975 (NCTC13712_01544) | - | 1626778..1627107 (-) | 330 | WP_047532027.1 | MTH1187 family thiamine-binding protein | - |
| EL116_RS07980 (NCTC13712_01545) | - | 1627107..1628093 (-) | 987 | WP_047532029.1 | ROK family glucokinase | - |
| EL116_RS07985 | - | 1628093..1628293 (-) | 201 | WP_047425719.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11169.38 Da Isoelectric Point: 9.1125
>NTDB_id=1120777 EL116_RS07945 WP_047532015.1 1623055..1623354(-) (comGE) [Staphylococcus schweitzeri strain NCTC13712]
MKNYKLKASFLLDSMAALMLLGLICLVLIPMMNQMHMNFYNEIKSIDASKTILTAASINSINKLKKGVTIGEYVIKLDDK
QICAITNENSSKFKECIQY
MKNYKLKASFLLDSMAALMLLGLICLVLIPMMNQMHMNFYNEIKSIDASKTILTAASINSINKLKKGVTIGEYVIKLDDK
QICAITNENSSKFKECIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1120777 EL116_RS07945 WP_047532015.1 1623055..1623354(-) (comGE) [Staphylococcus schweitzeri strain NCTC13712]
ATGAAAAATTATAAATTAAAAGCATCATTCCTTTTAGATAGCATGGCAGCACTTATGTTATTGGGATTAATATGTTTAGT
TTTAATACCAATGATGAATCAAATGCATATGAATTTTTATAATGAAATAAAAAGTATTGATGCATCAAAGACGATTCTAA
CTGCAGCTTCAATCAATAGTATAAATAAGCTAAAAAAAGGAGTAACAATTGGAGAATATGTTATTAAGTTGGATGATAAG
CAAATTTGTGCAATTACTAATGAAAATTCTTCAAAATTTAAAGAATGTATTCAATATTAA
ATGAAAAATTATAAATTAAAAGCATCATTCCTTTTAGATAGCATGGCAGCACTTATGTTATTGGGATTAATATGTTTAGT
TTTAATACCAATGATGAATCAAATGCATATGAATTTTTATAATGAAATAAAAAGTATTGATGCATCAAAGACGATTCTAA
CTGCAGCTTCAATCAATAGTATAAATAAGCTAAAAAAAGGAGTAACAATTGGAGAATATGTTATTAAGTTGGATGATAAG
CAAATTTGTGCAATTACTAATGAAAATTCTTCAAAATTTAAAGAATGTATTCAATATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
52.632 |
100 |
0.606 |
| comGE | Staphylococcus aureus N315 |
58.586 |
100 |
0.586 |