Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EL097_RS00085 Genome accession   NZ_LR134293
Coordinates   25161..25970 (-) Length   269 a.a.
NCBI ID   WP_003047202.1    Uniprot ID   A0A2D4DNS0
Organism   Streptococcus canis strain NCTC12191     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 20161..30970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL097_RS00075 (NCTC12191_00011) smc 20821..24366 (-) 3546 WP_129544904.1 chromosome segregation protein SMC -
  EL097_RS00080 (NCTC12191_00012) rnc 24367..25059 (-) 693 WP_003047203.1 ribonuclease III -
  EL097_RS00085 (NCTC12191_00013) vicX 25161..25970 (-) 810 WP_003047202.1 MBL fold metallo-hydrolase Regulator
  EL097_RS00090 (NCTC12191_00014) vicK 25974..27326 (-) 1353 WP_003047200.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EL097_RS00095 (NCTC12191_00015) vicR 27319..28029 (-) 711 WP_003047198.1 response regulator YycF Regulator
  EL097_RS00100 (NCTC12191_00016) - 28207..29202 (-) 996 WP_099982909.1 DUF3114 domain-containing protein -
  EL097_RS10750 - 29411..29680 (-) 270 WP_003047194.1 hypothetical protein -
  EL097_RS00110 (NCTC12191_00017) - 30076..30786 (-) 711 WP_003047191.1 MIP/aquaporin family protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30125.32 Da        Isoelectric Point: 6.0739

>NTDB_id=1120470 EL097_RS00085 WP_003047202.1 25161..25970(-) (vicX) [Streptococcus canis strain NCTC12191]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1120470 EL097_RS00085 WP_003047202.1 25161..25970(-) (vicX) [Streptococcus canis strain NCTC12191]
ATGATTGAAAGCGGTTTTAAATATAGTATTTTGGCATCTGGCTCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGCTTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGAGTGGGGGTCATGGCTCGTAAATACCATTTGGAC
GTCTATGCCAATGAAAAAACGTGGCAGTTGATGGATGAGCGCAATATGCTAGGAAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGGGTTAGCCATGATGCTGTTGATCCCC
AGTTTTACCGTATCATGAAAGACAACAAATCGTTTGTAATGCTGACTGATACAGGTTATGTTAGCGATCGAATGACAGGT
ATTATTGAAAATGCAGATGGTTACTTGATTGAGTCCAATCATGACATTGAAATTTTGCGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGATCTGGGCCATTTGTCAAATGAAGATGGTGCTGGGGCCATGATTAGAAGCTTGGGGC
ATAAGACGAAAAAAATCTATTTGGGCCATTTGAGTAAAGAAAATAACATCAAAGAGCTGGCTCACATGACCATGGTTAAC
CAATTAGCCATGGCAGACTTGGGAGTTGGAACAGATTTTACGGTTCATGACACTTCCCCAGATACGGCCTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D4DNS0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment