Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EL084_RS05920 Genome accession   NZ_LR134292
Coordinates   1211657..1212466 (-) Length   269 a.a.
NCBI ID   WP_004232789.1    Uniprot ID   E8JPJ0
Organism   Streptococcus equinus strain NCTC10389     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1206657..1217466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL084_RS05910 (NCTC10389_01251) smc 1207075..1210614 (-) 3540 WP_126440482.1 chromosome segregation protein SMC -
  EL084_RS05915 (NCTC10389_01252) rnc 1210761..1211447 (-) 687 WP_004232787.1 ribonuclease III -
  EL084_RS05920 (NCTC10389_01253) vicX 1211657..1212466 (-) 810 WP_004232789.1 MBL fold metallo-hydrolase Regulator
  EL084_RS05925 (NCTC10389_01254) vicK 1212467..1213819 (-) 1353 WP_115255368.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EL084_RS05930 (NCTC10389_01255) vicR 1213812..1214522 (-) 711 WP_021142846.1 response regulator YycF Regulator
  EL084_RS05935 (NCTC10389_01256) - 1214830..1215594 (+) 765 WP_126440484.1 amino acid ABC transporter ATP-binding protein -
  EL084_RS05940 (NCTC10389_01257) - 1215605..1216408 (+) 804 WP_126440487.1 transporter substrate-binding domain-containing protein -
  EL084_RS05945 (NCTC10389_01258) - 1216424..1217128 (+) 705 WP_004232799.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30219.03 Da        Isoelectric Point: 5.1978

>NTDB_id=1120447 EL084_RS05920 WP_004232789.1 1211657..1212466(-) (vicX) [Streptococcus equinus strain NCTC10389]
MSENAFKYSVLASGSTGNSFYVETSQKRLLIDAGLTGKKITSLLADIDRKPEDLDAILITHEHSDHIKGVGVLARRYNLD
VYANEKTWQMIDERNMIGKLDTAQKHVFERGKVLTFGDIDIESFGVSHDAVDPQFYRLMKDNKSFVVLTDTGYVSDRMAG
VIENADGYLIESNHDVEILRAGSYPWSLKQRILSDRGHLSNEDGADTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLMQADFAVGHDMTVFDTSPDEATPLTEI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1120447 EL084_RS05920 WP_004232789.1 1211657..1212466(-) (vicX) [Streptococcus equinus strain NCTC10389]
ATGTCTGAGAATGCTTTTAAATATAGTGTCTTAGCTTCCGGTTCTACTGGTAACTCATTTTATGTGGAAACATCACAAAA
ACGTCTTTTGATTGATGCAGGGTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGATATTGATCGAAAACCAGAAGATT
TGGATGCTATTTTAATTACACACGAACATTCCGACCATATTAAGGGTGTTGGAGTGCTTGCTCGTCGTTACAATCTTGAT
GTTTATGCCAATGAAAAAACTTGGCAAATGATTGATGAGCGCAATATGATTGGAAAACTTGATACCGCTCAGAAACATGT
TTTTGAGCGTGGTAAAGTATTGACTTTCGGTGATATTGATATTGAAAGTTTCGGAGTTAGCCACGATGCGGTTGACCCAC
AATTTTACCGTTTGATGAAAGATAACAAATCATTTGTTGTTTTGACTGATACGGGCTATGTTAGTGATAGAATGGCTGGC
GTCATTGAAAATGCAGATGGCTATTTGATTGAGTCAAATCACGATGTTGAGATTCTGCGTGCAGGTTCTTATCCATGGAG
CTTAAAACAACGTATCTTATCTGATAGAGGACATTTATCAAATGAGGATGGTGCAGATACGATGATTCGCACCATTGGTA
ATCGTACGAAAAAAATCTATCTTGGTCACTTGAGTAAGGAAAATAATATCAAAGAACTAGCTCACATGACTATGGAAAAT
AATTTGATGCAAGCTGATTTTGCGGTTGGACATGATATGACTGTTTTTGATACGTCACCGGATGAAGCAACGCCATTAAC
TGAAATCTAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E8JPJ0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment