Detailed information NTG1120401

Bioinformatically predicted

Overview

• Name: lytF
• Type: Regulator
• Locus tag: EL092_RS10460
• Genome accession: NZ_LR134291
• Coordinates: 2155829..2157478 (+)
• Length: 549 a.a.
• NCBI ID: WP_012131057.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain NCTC7868
• Function: cell lysis (predicted from homology) Cell lysis

Genomic Context

Location: 2150829..2162478

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL092_RS10430 (NCTC7868_02084)	-	2150974..2151201 (-)	228	WP_012131050.1	hypothetical protein	-
EL092_RS10435 (NCTC7868_02085)	-	2151221..2151484 (-)	264	WP_125367710.1	hypothetical protein	-
EL092_RS10440 (NCTC7868_02086)	purK	2151486..2152577 (-)	1092	WP_012131052.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
EL092_RS10445 (NCTC7868_02087)	purE	2152564..2153052 (-)	489	WP_012131053.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
EL092_RS10450 (NCTC7868_02088)	-	2153072..2154265 (-)	1194	WP_012131054.1	ATP-grasp domain-containing protein	-
EL092_RS10455 (NCTC7868_02089)	purD	2154325..2155584 (-)	1260	WP_012131055.1	phosphoribosylamine--glycine ligase	-
EL092_RS10460 (NCTC7868_02090)	lytF	2155829..2157478 (+)	1650	WP_012131057.1	GBS Bsp-like repeat-containing protein	Regulator
EL092_RS10465 (NCTC7868_02091)	comB	2157597..2158955 (-)	1359	WP_012131059.1	competence pheromone export protein ComB	Regulator
EL092_RS10470 (NCTC7868_02092)	comA	2158965..2161118 (-)	2154	WP_012131060.1	peptide cleavage/export ABC transporter ComA	Regulator
EL092_RS10475 (NCTC7868_02093)	rpsD	2161572..2162183 (-)	612	WP_008810013.1	30S ribosomal protein S4	-

Sequence

Protein

• Length: 549 a.a.
• Molecular weight: 60540.38 Da
• Isoelectric Point: 9.1621

>NTDB_id=1120401 EL092_RS10460 WP_012131057.1 2155829..2157478(+) (lytF) [Streptococcus gordonii strain NCTC7868]
MKKYKNFLLLSATLLTSLSAPLAAANEQFSPSQLTAMTSEVYVQLEGQTAIVQYQPTAAQEAYTIQHAVWSEEGGQDDIV
WYSADQSTTRIDLSQHKGQGKFLIETYLNVNSVKYHLSSKSVFLNKPVQSTEKTVPEQQDSTSSNNATPQAPAEPKPTNP
APTPAPAPATNRVENPRNSYPKVEERNKSLPPQKVAQPKVAPPQAEPNNNKPLQASAARVPAEPVRDSKPLISITNINKE
NGTYTVRVQENPYSKKIKSVQVPIWSTANQSNLKWYEASKIGNGSFSVQFDIRNHQQIYGNYINHVYITYEDGSRVGYVA
ENVNLPQPAPQPLTPSLQVVHKGQSTYQVILQNSFGDGHILFPIWSDINGQDDLRWYTANSLGNGRYSLDFNANNHIGDG
LYHVHVYRQSGGKVTGVMASNFQVTRPTVAVRKPLNHTTDPSNTYPVGECTWGAKALAPWAGNWWGNGGDWAASARRAGF
RVGSTPQVGAIACWTDGGYGHVGVVTHVDSHKRIQIQESNYAGQRYIANFRGWFDPTIAQGTVSYIYPN

Nucleotide

• Length: 1650 bp

>NTDB_id=1120401 EL092_RS10460 WP_012131057.1 2155829..2157478(+) (lytF) [Streptococcus gordonii strain NCTC7868]
ATGAAAAAATACAAAAATTTCTTACTGCTTTCAGCAACCTTGTTGACCTCACTATCTGCTCCATTAGCTGCAGCGAATGA
ACAGTTTAGCCCATCCCAACTGACGGCTATGACCAGCGAAGTTTACGTTCAGCTTGAAGGACAAACAGCGATTGTTCAGT
ACCAACCGACCGCTGCGCAAGAAGCTTATACCATCCAACATGCCGTCTGGTCTGAGGAGGGAGGCCAAGACGATATTGTC
TGGTATTCAGCTGATCAAAGCACGACCAGGATTGACTTGTCTCAACACAAGGGCCAGGGTAAATTTCTCATCGAGACTTA
TCTCAATGTGAATAGTGTCAAATATCACTTGAGTAGTAAATCGGTCTTTCTAAACAAGCCGGTTCAATCAACCGAAAAAA
CTGTCCCTGAACAGCAAGACAGCACTTCGTCTAACAATGCCACACCTCAAGCACCGGCTGAGCCAAAACCAACTAACCCA
GCACCTACTCCAGCTCCGGCTCCCGCGACCAATAGAGTTGAAAATCCTCGGAACTCCTATCCAAAAGTCGAAGAGCGAAA
CAAATCTCTTCCTCCTCAAAAGGTAGCTCAACCAAAGGTGGCGCCCCCTCAGGCAGAGCCAAACAACAACAAACCTCTGC
AAGCTTCAGCTGCTAGAGTACCGGCAGAGCCTGTCAGAGACAGCAAGCCACTCATCAGTATTACCAACATTAATAAGGAA
AATGGAACCTATACCGTAAGGGTCCAAGAAAACCCTTATTCCAAGAAAATTAAAAGTGTGCAGGTGCCTATTTGGAGCAC
CGCAAATCAAAGCAATCTTAAATGGTATGAGGCTTCAAAGATAGGTAACGGAAGCTTTTCTGTTCAATTCGACATCCGAA
ATCACCAGCAGATTTACGGCAACTATATCAATCACGTCTACATTACCTATGAAGACGGTAGCCGAGTTGGCTATGTTGCT
GAAAATGTCAATCTGCCTCAGCCAGCACCCCAACCACTAACTCCGAGTCTGCAAGTGGTTCATAAAGGCCAATCGACCTA
TCAAGTTATCTTACAAAATAGTTTCGGTGACGGCCATATCCTCTTCCCCATCTGGTCAGATATTAATGGCCAAGACGACC
TCCGCTGGTATACAGCTAATTCTCTTGGTAATGGGCGCTATTCGTTAGATTTCAACGCCAACAATCATATCGGTGACGGT
CTCTATCATGTCCATGTCTATCGACAATCTGGCGGGAAAGTAACGGGTGTCATGGCCTCTAATTTTCAAGTAACACGCCC
AACGGTAGCTGTGAGAAAACCTCTTAACCATACGACCGACCCAAGTAATACTTACCCTGTTGGTGAATGCACATGGGGTG
CCAAGGCTCTCGCTCCTTGGGCAGGAAACTGGTGGGGAAATGGTGGGGACTGGGCAGCCAGTGCTCGCCGAGCAGGATTC
CGTGTAGGATCCACACCTCAGGTCGGAGCCATTGCCTGCTGGACTGACGGTGGATACGGACATGTCGGCGTCGTCACGCA
TGTTGATTCACATAAGCGTATCCAAATTCAGGAATCCAACTACGCTGGACAGCGCTATATCGCTAATTTCCGTGGCTGGT
TTGACCCAACCATCGCTCAGGGCACGGTTTCCTATATCTACCCAAATTAA

Domains

Predicted by InterproScan.

• CHAP domain (CHAP) (443-520)

• GBS Bsp-like repeat (GBS_Bsp-like) (342-414)

• GBS Bsp-like repeat (GBS_Bsp-like) (234-319)

• GBS Bsp-like repeat (GBS_Bsp-like) (53-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
lytF	Streptococcus gordonii str. Challis substr. CH1	100	100	1
lytF	Streptococcus gordonii strain NCTC7865	95.446	100	0.954