Detailed information NTG1120319

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: EL191_RS08435
• Genome accession: NZ_LR134290
• Coordinates: 1825556..1827769 (+)
• Length: 737 a.a.
• NCBI ID: WP_041978015.1
• Uniprot ID: -
• Organism: Ectopseudomonas mendocina strain NCTC10897
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1820556..1832769

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL191_RS08410 (NCTC10897_01688)	-	1820802..1821368 (-)	567	WP_013714794.1	PilZ domain-containing protein	-
EL191_RS08415 (NCTC10897_01689)	-	1821659..1822906 (+)	1248	WP_017361511.1	lipoprotein-releasing ABC transporter permease subunit	-
EL191_RS08420 (NCTC10897_01690)	lolD	1822911..1823612 (+)	702	WP_041978008.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
EL191_RS08425 (NCTC10897_01691)	-	1823612..1824856 (+)	1245	WP_041978010.1	lipoprotein-releasing ABC transporter permease subunit	-
EL191_RS08430 (NCTC10897_01692)	-	1824890..1825417 (-)	528	WP_041978012.1	DUF2062 domain-containing protein	-
EL191_RS08435 (NCTC10897_01693)	comA	1825556..1827769 (+)	2214	WP_041978015.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
EL191_RS08440 (NCTC10897_01694)	-	1827826..1828458 (+)	633	WP_013714801.1	MotA/TolQ/ExbB proton channel family protein	-
EL191_RS08445 (NCTC10897_01695)	-	1828455..1828883 (+)	429	WP_013714802.1	biopolymer transporter ExbD	-
EL191_RS08450 (NCTC10897_01696)	lpxK	1828884..1829885 (+)	1002	WP_041978018.1	tetraacyldisaccharide 4'-kinase	-
EL191_RS08455 (NCTC10897_01697)	-	1829908..1830093 (+)	186	WP_013714804.1	Trm112 family protein	-
EL191_RS08460 (NCTC10897_01698)	kdsB	1830094..1830858 (+)	765	WP_041978020.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
EL191_RS08465 (NCTC10897_01699)	-	1830858..1831322 (+)	465	WP_041978024.1	low molecular weight protein-tyrosine-phosphatase	-
EL191_RS08470 (NCTC10897_01700)	murB	1831319..1832338 (+)	1020	WP_041978026.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 80001.09 Da
• Isoelectric Point: 9.2546

>NTDB_id=1120319 EL191_RS08435 WP_041978015.1 1825556..1827769(+) (comA) [Ectopseudomonas mendocina strain NCTC10897]
MLALALGLLSLRFLPSLPPGWLLLVAACVGLALLLSRLYPLGFFLLGLAWACNSAQWALDDRLGPELDGRTLWLEGRVVG
LPEVSDGVVRFLLEDAHSRRADLPKRLRVAWYDGPTVQGGERWRLAVNLKRPHGLVNPQSFDYEAWLLAQRIGATGTIKS
GQRLAPASGLGSWRDSLRQRLLAAPAVEREGAIAALVLGDGSGLSTKDWRLLQHTGTVHLMVISGQHIGLLAGFLYGLVA
LLAKLGAWPARWPWLPCACALALGGALTYGLLAGFEVPVRRACVMVALVLLWRMRFRHLGAWWPLLLALIVVLLLEPLAS
LQPGFWLSFSAVAILALVFGGRLGVWGWWRGLTRAQWTMAIGLLPMMLVLGLPVSSSGPLANLIAVPWVGLVVVPLALLG
TLLLPIPMLGEGLLWLAGGALHLLFELLGIIAGWLPAWLPSVLPLWAWWLAAAGALLLLLPAGVPLRLPGLALLLPALLL
PAPHLDDGRADIWVLDVGQGLAVLVRTREHALLYDAGPRFGDFDTGERIVLPSLRALNLRQLDVMLLSHADNDHAGGAAA
IKAGMPVSRVVSGEPRRLADALGAEACESGQSWQWNEVVFRLWQWERASSGNQLSCVLQIEAAGERLLLTGDIDVQAERA
LMQADFPLSSQWLLAPHHGSRTSSSQAFIDAVGAQHVLITRSRHNAFGHPHPQVLERYRAAGVLVHDTALDGALHLRLGE
HGAARALRREPRFWREK

Nucleotide

• Length: 2214 bp

>NTDB_id=1120319 EL191_RS08435 WP_041978015.1 1825556..1827769(+) (comA) [Ectopseudomonas mendocina strain NCTC10897]
ATGTTGGCGCTGGCCTTGGGGCTGCTCAGCTTGCGCTTTCTACCGAGCCTGCCGCCAGGCTGGCTGTTGCTGGTTGCAGC
TTGTGTCGGCCTGGCTTTGCTGCTCTCGCGTCTCTATCCGCTGGGGTTCTTTTTGCTGGGGCTGGCCTGGGCCTGCAATT
CTGCGCAGTGGGCGCTGGATGATCGCCTCGGCCCTGAGCTCGACGGCCGCACGCTATGGCTGGAAGGGCGGGTGGTCGGA
TTGCCCGAGGTATCCGATGGTGTGGTGCGCTTCCTGCTGGAGGATGCGCACTCGCGTCGCGCCGACCTGCCAAAAAGGTT
GCGGGTGGCCTGGTATGACGGGCCGACAGTGCAGGGCGGCGAGCGCTGGCGTCTGGCGGTCAACCTGAAGCGGCCGCATG
GCCTGGTCAATCCGCAGAGCTTCGACTACGAAGCCTGGTTGCTGGCACAGCGTATCGGTGCCACAGGCACGATCAAATCC
GGTCAGCGCCTTGCTCCAGCTTCGGGCCTGGGCAGTTGGCGTGACAGCCTGCGCCAGCGCTTGTTGGCGGCGCCGGCTGT
TGAGCGCGAAGGCGCCATCGCTGCGCTGGTACTGGGCGACGGCTCTGGCTTGAGCACCAAAGATTGGCGCCTGTTGCAGC
ACACCGGCACGGTGCACCTGATGGTCATTTCCGGGCAGCACATCGGACTGCTGGCCGGCTTTCTCTATGGTTTGGTGGCC
TTGCTGGCCAAGCTCGGCGCATGGCCGGCGCGCTGGCCATGGCTACCTTGCGCCTGTGCTCTGGCGCTGGGCGGGGCCTT
GACCTATGGCTTGCTGGCGGGCTTCGAGGTGCCGGTGCGCAGGGCTTGCGTGATGGTCGCGTTGGTGCTGCTGTGGCGCA
TGCGCTTTCGTCATCTTGGTGCGTGGTGGCCATTGTTGCTGGCCTTGATCGTGGTTCTGCTGCTGGAGCCGCTGGCATCG
TTGCAGCCGGGTTTCTGGTTGTCATTTTCGGCGGTGGCGATTCTGGCTCTGGTGTTTGGCGGTCGACTTGGCGTCTGGGG
TTGGTGGCGCGGGCTCACGCGTGCGCAATGGACCATGGCCATCGGCCTGTTGCCGATGATGTTAGTCCTCGGCCTGCCGG
TCAGCAGCAGCGGGCCGTTGGCCAATCTGATCGCCGTGCCCTGGGTCGGATTGGTGGTGGTGCCTCTGGCCTTGCTGGGC
ACCTTGCTGCTGCCTATACCAATGCTGGGCGAAGGGCTGTTGTGGCTGGCCGGTGGTGCGCTGCACCTGCTGTTCGAGTT
GCTCGGCATCATCGCCGGCTGGCTACCCGCCTGGTTGCCGAGCGTTCTGCCGCTGTGGGCATGGTGGCTGGCGGCAGCTG
GTGCTTTGCTGCTCCTTTTGCCGGCCGGGGTGCCGCTGCGGTTGCCCGGTCTTGCGCTGTTGTTGCCCGCATTGTTATTG
CCAGCGCCGCATCTGGATGATGGTCGCGCCGACATCTGGGTGCTGGATGTGGGGCAAGGGCTGGCGGTGCTGGTGCGTAC
CCGAGAGCATGCTCTGCTGTACGACGCTGGGCCGCGCTTTGGTGATTTCGATACCGGTGAGCGCATCGTCCTGCCCTCGT
TGCGGGCGCTGAACCTCAGGCAGCTCGACGTGATGCTGCTCAGCCATGCCGATAACGATCATGCTGGCGGCGCGGCCGCG
ATCAAGGCCGGTATGCCGGTATCGAGGGTGGTCAGTGGTGAACCGCGAAGGCTGGCCGATGCGCTCGGCGCCGAAGCGTG
CGAGTCAGGACAAAGCTGGCAATGGAACGAGGTGGTCTTCAGGCTGTGGCAGTGGGAACGCGCCAGCTCCGGCAACCAGC
TGTCGTGCGTATTGCAGATAGAGGCTGCGGGCGAACGCCTGCTATTGACCGGCGATATCGATGTACAGGCCGAGCGGGCG
CTGATGCAGGCCGACTTTCCCCTGTCTTCGCAGTGGCTGCTGGCCCCTCATCATGGCAGTCGCACCTCGTCCAGCCAGGC
GTTCATCGATGCGGTTGGTGCGCAGCATGTGCTGATTACCCGCAGCCGCCACAATGCCTTCGGCCATCCTCATCCGCAGG
TGCTGGAGCGTTATCGTGCAGCAGGCGTGTTGGTCCATGACACGGCGCTCGATGGCGCGCTGCATCTGCGCCTGGGCGAG
CATGGCGCAGCGCGGGCATTGCGACGCGAGCCACGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (196-460)

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-672)

• Domain of unknown function (DUF4131) (DUF4131) (17-163)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.967	97.422	0.662
comA	Ralstonia pseudosolanacearum GMI1000	36.33	100	0.395