Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EL087_RS08370 | Genome accession | NZ_LR134288 |
| Coordinates | 1699676..1702105 (-) | Length | 809 a.a. |
| NCBI ID | WP_126407960.1 | Uniprot ID | - |
| Organism | Streptococcus milleri strain NCTC11169 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1694676..1707105
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL087_RS08345 (NCTC11169_01722) | - | 1694957..1695775 (+) | 819 | WP_126407954.1 | hypothetical protein | - |
| EL087_RS08350 (NCTC11169_01723) | - | 1695793..1697064 (+) | 1272 | WP_049533051.1 | toxic anion resistance protein | - |
| EL087_RS08355 (NCTC11169_01724) | hslO | 1697285..1698157 (+) | 873 | WP_313769825.1 | Hsp33 family molecular chaperone HslO | - |
| EL087_RS08360 (NCTC11169_01725) | dusB | 1698144..1699115 (+) | 972 | WP_164558141.1 | tRNA dihydrouridine synthase DusB | - |
| EL087_RS08365 (NCTC11169_01726) | - | 1699247..1699630 (-) | 384 | WP_126407958.1 | GNAT family N-acetyltransferase | - |
| EL087_RS08370 (NCTC11169_01727) | clpC | 1699676..1702105 (-) | 2430 | WP_126407960.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| EL087_RS08375 (NCTC11169_01728) | - | 1702109..1702570 (-) | 462 | WP_037567136.1 | CtsR family transcriptional regulator | - |
| EL087_RS08380 (NCTC11169_01729) | - | 1702830..1703180 (+) | 351 | WP_037567137.1 | hypothetical protein | - |
| EL087_RS08385 (NCTC11169_01730) | tsf | 1703267..1704310 (-) | 1044 | WP_003041778.1 | translation elongation factor Ts | - |
| EL087_RS08390 (NCTC11169_01731) | rpsB | 1704394..1705176 (-) | 783 | WP_022525388.1 | 30S ribosomal protein S2 | - |
| EL087_RS08395 (NCTC11169_01732) | comR/comR2 | 1705410..1705883 (-) | 474 | WP_022527131.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| EL087_RS08400 (NCTC11169_01734) | rplQ | 1706292..1706678 (-) | 387 | WP_126407962.1 | 50S ribosomal protein L17 | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89903.23 Da Isoelectric Point: 6.7177
>NTDB_id=1120281 EL087_RS08370 WP_126407960.1 1699676..1702105(-) (clpC) [Streptococcus milleri strain NCTC11169]
MKYSKALTKSIESAQLLASHFETDYLESWHLLIAMANNPYSVAGSVLNDYPLEIDDFEKAAFHITGKIYQQEGSFTIWPF
SHRMKVLFLTAERIAEAVHAKNLGTEHVLLAMLFDRGSLAARLLEFTGFSYEDKEGVLRMTDLRKNLEHKASWGKEDIKA
IRHLNKNTAAAKQTMANMMGMPPSTSGGLEDYTRDLTEMARAGLLEPVVGRDEEISRMLQILSRKTKNNPVLVGDAGVGK
TALALGLAQRVAAGQVPNELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIETDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKYIEKDAALSRRFAKVTIEEPTVADSIAILQGLKKSYEEHHKVVITDSAIET
AVKYAHRYLTSKHLPDSAIDLLDEAAATVQNKGPQNHVKAELSAADTALMAGDWKKVGALLEKESQPIVYKLKVKDEDIL
ATLSGLSGIPVQKLTQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDARFDHESMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSE
DMQEVVKIMVKPLIVSLAEKGIELKFQPSALKLLAKKGYDPEMGARPLRRTLQTQVEDHLSEFLLAGELQTGQRLKVGVK
AGQLKFEVL
MKYSKALTKSIESAQLLASHFETDYLESWHLLIAMANNPYSVAGSVLNDYPLEIDDFEKAAFHITGKIYQQEGSFTIWPF
SHRMKVLFLTAERIAEAVHAKNLGTEHVLLAMLFDRGSLAARLLEFTGFSYEDKEGVLRMTDLRKNLEHKASWGKEDIKA
IRHLNKNTAAAKQTMANMMGMPPSTSGGLEDYTRDLTEMARAGLLEPVVGRDEEISRMLQILSRKTKNNPVLVGDAGVGK
TALALGLAQRVAAGQVPNELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIETDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKYIEKDAALSRRFAKVTIEEPTVADSIAILQGLKKSYEEHHKVVITDSAIET
AVKYAHRYLTSKHLPDSAIDLLDEAAATVQNKGPQNHVKAELSAADTALMAGDWKKVGALLEKESQPIVYKLKVKDEDIL
ATLSGLSGIPVQKLTQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDARFDHESMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSE
DMQEVVKIMVKPLIVSLAEKGIELKFQPSALKLLAKKGYDPEMGARPLRRTLQTQVEDHLSEFLLAGELQTGQRLKVGVK
AGQLKFEVL
Nucleotide
Download Length: 2430 bp
>NTDB_id=1120281 EL087_RS08370 WP_126407960.1 1699676..1702105(-) (clpC) [Streptococcus milleri strain NCTC11169]
ATGAAATATTCAAAAGCTTTGACAAAAAGTATTGAGTCGGCGCAACTGCTAGCAAGCCATTTTGAAACAGATTATTTGGA
GTCTTGGCATTTGTTGATTGCCATGGCGAATAATCCTTATAGTGTTGCGGGTTCTGTTTTAAATGATTATCCGCTTGAAA
TTGATGATTTTGAGAAAGCAGCCTTTCATATCACAGGAAAGATTTATCAACAAGAGGGAAGCTTTACCATTTGGCCATTT
TCTCATCGTATGAAAGTGTTGTTTTTGACAGCTGAGCGAATTGCAGAGGCTGTGCATGCTAAGAATCTTGGGACAGAGCA
TGTGTTGTTAGCTATGCTGTTTGACCGAGGAAGTTTGGCGGCACGTCTCCTTGAATTTACAGGCTTTAGCTATGAGGATA
AAGAAGGCGTTTTGCGCATGACTGATCTTCGGAAAAACTTAGAGCATAAGGCTAGCTGGGGTAAAGAAGATATAAAGGCT
ATTCGCCACTTAAATAAAAATACTGCTGCTGCGAAACAAACGATGGCCAATATGATGGGAATGCCTCCTTCTACCAGCGG
CGGGCTAGAAGACTATACCCGTGATTTAACCGAAATGGCTCGTGCTGGTCTTTTAGAACCGGTCGTTGGGCGTGATGAAG
AAATTTCGCGTATGCTTCAGATTCTAAGTCGCAAGACGAAAAACAATCCAGTTTTGGTAGGAGATGCAGGAGTTGGGAAG
ACAGCATTGGCCCTTGGTTTGGCACAGCGTGTGGCTGCTGGTCAGGTGCCAAATGAGCTTGCAAAGATGAGAGTTCTGGA
GCTGGATTTGATGAATGTGGTAGCTGGAACTCGTTTTCGTGGTGATTTTGAAGAACGGATGAACAATATTATCAATGATA
TTGAAACAGACGGGCATGTGATTCTTTTCATTGATGAGCTTCATACCATTATGGGTTCTGGTAGCGGGATTGACTCGACG
TTGGATGCAGCGAACATTCTCAAGCCAGCTTTGGCCAGAGGAACACTTAGAACGGTCGGCGCAACGACACAAGAAGAGTA
CCAGAAATATATTGAAAAGGACGCAGCTCTTTCACGGCGATTTGCCAAGGTTACTATTGAAGAGCCGACAGTAGCTGATA
GTATTGCGATTTTACAGGGGCTCAAGAAAAGCTATGAAGAACACCACAAAGTGGTGATTACAGATTCAGCGATTGAGACA
GCTGTTAAGTATGCTCATCGTTATCTAACAAGCAAACATCTACCTGACTCGGCGATTGATTTGTTAGATGAAGCTGCTGC
AACGGTACAAAATAAAGGCCCGCAAAATCATGTAAAAGCAGAATTGAGTGCAGCAGATACGGCTTTAATGGCAGGCGATT
GGAAAAAGGTTGGCGCTTTGTTGGAGAAAGAAAGTCAGCCAATTGTCTACAAACTAAAGGTTAAAGATGAGGATATTTTG
GCAACACTCAGCGGTTTATCAGGGATTCCTGTGCAAAAGTTGACGCAAACAGATGCGAAGAAATATCTCCATTTAGAGAA
GGAACTGCACAAACGGGTCATTGGGCAAAATGAAGCAATTTCTGCTATCAGTCGAGCGATTCGGCGCAATCAATCTGGCA
TCCGCACCAGCAAACGTCCAATTGGCTCCTTTATGTTCTTGGGCCCAACCGGGGTTGGAAAAACTGAGCTGGCTAAGGCT
TTAGCAGAAGTCCTCTTTGATGATGAGTCAGCGCTGATTCGTTTTGATATGTCCGAATATATGGAGAAATTTGCTGCCAG
TCGTCTCAATGGAGCGCCTCCAGGTTATGTCGGTTATGAAGAAGGGGGCGAATTGACTGAAAAAGTTCGCAATCGTCCTT
ATTCGGTGCTCCTCTTTGACGAGGTGGAAAAAGCTCATCCTGATATTTTCAATGTGCTTCTTCAAGTCTTAGATGACGGG
GTGCTGACCGACAGCAAGGGACGTAAGGTGGATTTTTCTAATACCATTATCATTATGACCAGCAATCTTGGTGCGACAAG
TTTGCGGGACGATAAGACGGTCGGTTTTGGAGCGCGTGATGCCCGCTTTGATCATGAAAGCATGGAAAAACGGATGATGG
AAGAGCTCAAGAAAAGTTATCGTCCGGAATTTATCAACCGGATTGATGAAAAGGTTGTTTTCCATAGCTTGACTAGCGAA
GATATGCAAGAAGTGGTAAAAATTATGGTGAAACCACTCATTGTCAGTCTCGCTGAAAAAGGAATTGAGCTGAAATTCCA
ACCTAGTGCTTTGAAACTTCTGGCTAAAAAAGGTTACGATCCTGAAATGGGAGCAAGGCCACTTCGCAGAACTCTACAAA
CTCAAGTAGAAGATCATTTATCCGAATTTCTTTTAGCTGGTGAGTTACAGACGGGACAACGTTTGAAAGTCGGTGTCAAA
GCTGGGCAGCTGAAGTTTGAAGTGCTCTGA
ATGAAATATTCAAAAGCTTTGACAAAAAGTATTGAGTCGGCGCAACTGCTAGCAAGCCATTTTGAAACAGATTATTTGGA
GTCTTGGCATTTGTTGATTGCCATGGCGAATAATCCTTATAGTGTTGCGGGTTCTGTTTTAAATGATTATCCGCTTGAAA
TTGATGATTTTGAGAAAGCAGCCTTTCATATCACAGGAAAGATTTATCAACAAGAGGGAAGCTTTACCATTTGGCCATTT
TCTCATCGTATGAAAGTGTTGTTTTTGACAGCTGAGCGAATTGCAGAGGCTGTGCATGCTAAGAATCTTGGGACAGAGCA
TGTGTTGTTAGCTATGCTGTTTGACCGAGGAAGTTTGGCGGCACGTCTCCTTGAATTTACAGGCTTTAGCTATGAGGATA
AAGAAGGCGTTTTGCGCATGACTGATCTTCGGAAAAACTTAGAGCATAAGGCTAGCTGGGGTAAAGAAGATATAAAGGCT
ATTCGCCACTTAAATAAAAATACTGCTGCTGCGAAACAAACGATGGCCAATATGATGGGAATGCCTCCTTCTACCAGCGG
CGGGCTAGAAGACTATACCCGTGATTTAACCGAAATGGCTCGTGCTGGTCTTTTAGAACCGGTCGTTGGGCGTGATGAAG
AAATTTCGCGTATGCTTCAGATTCTAAGTCGCAAGACGAAAAACAATCCAGTTTTGGTAGGAGATGCAGGAGTTGGGAAG
ACAGCATTGGCCCTTGGTTTGGCACAGCGTGTGGCTGCTGGTCAGGTGCCAAATGAGCTTGCAAAGATGAGAGTTCTGGA
GCTGGATTTGATGAATGTGGTAGCTGGAACTCGTTTTCGTGGTGATTTTGAAGAACGGATGAACAATATTATCAATGATA
TTGAAACAGACGGGCATGTGATTCTTTTCATTGATGAGCTTCATACCATTATGGGTTCTGGTAGCGGGATTGACTCGACG
TTGGATGCAGCGAACATTCTCAAGCCAGCTTTGGCCAGAGGAACACTTAGAACGGTCGGCGCAACGACACAAGAAGAGTA
CCAGAAATATATTGAAAAGGACGCAGCTCTTTCACGGCGATTTGCCAAGGTTACTATTGAAGAGCCGACAGTAGCTGATA
GTATTGCGATTTTACAGGGGCTCAAGAAAAGCTATGAAGAACACCACAAAGTGGTGATTACAGATTCAGCGATTGAGACA
GCTGTTAAGTATGCTCATCGTTATCTAACAAGCAAACATCTACCTGACTCGGCGATTGATTTGTTAGATGAAGCTGCTGC
AACGGTACAAAATAAAGGCCCGCAAAATCATGTAAAAGCAGAATTGAGTGCAGCAGATACGGCTTTAATGGCAGGCGATT
GGAAAAAGGTTGGCGCTTTGTTGGAGAAAGAAAGTCAGCCAATTGTCTACAAACTAAAGGTTAAAGATGAGGATATTTTG
GCAACACTCAGCGGTTTATCAGGGATTCCTGTGCAAAAGTTGACGCAAACAGATGCGAAGAAATATCTCCATTTAGAGAA
GGAACTGCACAAACGGGTCATTGGGCAAAATGAAGCAATTTCTGCTATCAGTCGAGCGATTCGGCGCAATCAATCTGGCA
TCCGCACCAGCAAACGTCCAATTGGCTCCTTTATGTTCTTGGGCCCAACCGGGGTTGGAAAAACTGAGCTGGCTAAGGCT
TTAGCAGAAGTCCTCTTTGATGATGAGTCAGCGCTGATTCGTTTTGATATGTCCGAATATATGGAGAAATTTGCTGCCAG
TCGTCTCAATGGAGCGCCTCCAGGTTATGTCGGTTATGAAGAAGGGGGCGAATTGACTGAAAAAGTTCGCAATCGTCCTT
ATTCGGTGCTCCTCTTTGACGAGGTGGAAAAAGCTCATCCTGATATTTTCAATGTGCTTCTTCAAGTCTTAGATGACGGG
GTGCTGACCGACAGCAAGGGACGTAAGGTGGATTTTTCTAATACCATTATCATTATGACCAGCAATCTTGGTGCGACAAG
TTTGCGGGACGATAAGACGGTCGGTTTTGGAGCGCGTGATGCCCGCTTTGATCATGAAAGCATGGAAAAACGGATGATGG
AAGAGCTCAAGAAAAGTTATCGTCCGGAATTTATCAACCGGATTGATGAAAAGGTTGTTTTCCATAGCTTGACTAGCGAA
GATATGCAAGAAGTGGTAAAAATTATGGTGAAACCACTCATTGTCAGTCTCGCTGAAAAAGGAATTGAGCTGAAATTCCA
ACCTAGTGCTTTGAAACTTCTGGCTAAAAAAGGTTACGATCCTGAAATGGGAGCAAGGCCACTTCGCAGAACTCTACAAA
CTCAAGTAGAAGATCATTTATCCGAATTTCTTTTAGCTGGTGAGTTACAGACGGGACAACGTTTGAAAGTCGGTGTCAAA
GCTGGGCAGCTGAAGTTTGAAGTGCTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
77.682 |
100 |
0.779 |
| clpC | Streptococcus pneumoniae Rx1 |
77.682 |
100 |
0.779 |
| clpC | Streptococcus pneumoniae D39 |
77.682 |
100 |
0.779 |
| clpC | Streptococcus mutans UA159 |
66.871 |
100 |
0.674 |
| clpC | Streptococcus thermophilus LMG 18311 |
66.34 |
100 |
0.67 |
| clpC | Streptococcus thermophilus LMD-9 |
66.218 |
100 |
0.669 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.759 |
100 |
0.511 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.923 |
100 |
0.451 |
| clpE | Streptococcus mutans UA159 |
47.749 |
76.885 |
0.367 |
| clpE | Streptococcus pneumoniae Rx1 |
47.125 |
77.379 |
0.365 |
| clpE | Streptococcus pneumoniae D39 |
47.125 |
77.379 |
0.365 |
| clpE | Streptococcus pneumoniae R6 |
47.125 |
77.379 |
0.365 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.125 |
77.379 |
0.365 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
44.31 |
81.459 |
0.361 |