Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | EL111_RS02590 | Genome accession | NZ_LR134287 |
| Coordinates | 550262..550843 (-) | Length | 193 a.a. |
| NCBI ID | WP_123795521.1 | Uniprot ID | A0A5P3MS37 |
| Organism | Neisseria animalis strain NCTC10212 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 545262..555843
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL111_RS02570 (NCTC10212_00529) | - | 546252..546770 (-) | 519 | WP_123795525.1 | shikimate kinase | - |
| EL111_RS02575 (NCTC10212_00530) | pilQ | 546891..548954 (-) | 2064 | WP_123795524.1 | type IV pilus secretin PilQ | Machinery gene |
| EL111_RS02580 (NCTC10212_00531) | - | 549011..549583 (-) | 573 | WP_123795523.1 | pilus assembly protein PilP | - |
| EL111_RS02585 (NCTC10212_00532) | - | 549603..550262 (-) | 660 | WP_123795522.1 | type 4a pilus biogenesis protein PilO | - |
| EL111_RS02590 (NCTC10212_00533) | pilN | 550262..550843 (-) | 582 | WP_123795521.1 | PilN domain-containing protein | Machinery gene |
| EL111_RS02595 (NCTC10212_00534) | pilM | 550844..551956 (-) | 1113 | WP_123795520.1 | type IV pilus assembly protein PilM | - |
| EL111_RS02600 (NCTC10212_00535) | - | 552116..554515 (+) | 2400 | WP_123795519.1 | penicillin-binding protein 1A | - |
| EL111_RS02605 (NCTC10212_00536) | rfaE2 | 554699..555214 (+) | 516 | WP_162842977.1 | D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21846.96 Da Isoelectric Point: 9.6084
>NTDB_id=1120204 EL111_RS02590 WP_123795521.1 550262..550843(-) (pilN) [Neisseria animalis strain NCTC10212]
MIEPIKINLLPYRETDRQKRKQQFKILMLVAAATGLCLSAVIYATLNTAIANQENRNRFLESEIAKLDQNLGEIQQLQQE
KADFLSKKQTVEELQRKRYQAARIIDSLNTLTPEQTYLTSLEAEDSSTYKLSGRAANDNKVAVLMRALPASGTFEQPELL
GIKKTGSHQEFSLKIRLTGTPQNRTTLPQEQQP
MIEPIKINLLPYRETDRQKRKQQFKILMLVAAATGLCLSAVIYATLNTAIANQENRNRFLESEIAKLDQNLGEIQQLQQE
KADFLSKKQTVEELQRKRYQAARIIDSLNTLTPEQTYLTSLEAEDSSTYKLSGRAANDNKVAVLMRALPASGTFEQPELL
GIKKTGSHQEFSLKIRLTGTPQNRTTLPQEQQP
Nucleotide
Download Length: 582 bp
>NTDB_id=1120204 EL111_RS02590 WP_123795521.1 550262..550843(-) (pilN) [Neisseria animalis strain NCTC10212]
ATGATAGAACCGATTAAAATCAATCTGCTGCCCTACCGCGAAACCGACAGGCAGAAGCGCAAGCAACAGTTTAAAATCCT
CATGCTGGTCGCGGCAGCGACCGGTTTGTGCCTGAGTGCCGTAATTTACGCCACCCTCAACACCGCCATAGCCAATCAGG
AAAACCGCAACCGCTTTTTGGAAAGCGAAATTGCCAAATTAGACCAAAACTTGGGAGAAATCCAACAGCTTCAGCAAGAA
AAAGCCGATTTTTTAAGCAAAAAGCAAACGGTAGAGGAATTACAGAGAAAACGCTACCAAGCCGCCCGCATCATCGACTC
CCTCAACACGCTGACGCCCGAACAGACCTACCTGACCTCACTGGAAGCGGAAGACTCCTCAACCTACAAATTGAGCGGAC
GCGCAGCAAACGACAACAAAGTCGCCGTACTGATGCGCGCCCTGCCCGCAAGCGGAACATTTGAGCAGCCCGAGCTGCTG
GGCATCAAAAAAACAGGCAGTCACCAAGAGTTCAGCCTGAAAATACGCCTGACCGGCACACCGCAAAACCGGACAACCCT
ACCGCAGGAGCAACAACCGTAA
ATGATAGAACCGATTAAAATCAATCTGCTGCCCTACCGCGAAACCGACAGGCAGAAGCGCAAGCAACAGTTTAAAATCCT
CATGCTGGTCGCGGCAGCGACCGGTTTGTGCCTGAGTGCCGTAATTTACGCCACCCTCAACACCGCCATAGCCAATCAGG
AAAACCGCAACCGCTTTTTGGAAAGCGAAATTGCCAAATTAGACCAAAACTTGGGAGAAATCCAACAGCTTCAGCAAGAA
AAAGCCGATTTTTTAAGCAAAAAGCAAACGGTAGAGGAATTACAGAGAAAACGCTACCAAGCCGCCCGCATCATCGACTC
CCTCAACACGCTGACGCCCGAACAGACCTACCTGACCTCACTGGAAGCGGAAGACTCCTCAACCTACAAATTGAGCGGAC
GCGCAGCAAACGACAACAAAGTCGCCGTACTGATGCGCGCCCTGCCCGCAAGCGGAACATTTGAGCAGCCCGAGCTGCTG
GGCATCAAAAAAACAGGCAGTCACCAAGAGTTCAGCCTGAAAATACGCCTGACCGGCACACCGCAAAACCGGACAACCCT
ACCGCAGGAGCAACAACCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
55.491 |
89.637 |
0.497 |