Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   EL100_RS03740 Genome accession   NZ_LR134285
Coordinates   710851..711612 (-) Length   253 a.a.
NCBI ID   WP_126405019.1    Uniprot ID   -
Organism   Streptococcus australis strain NCTC3168     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 705851..716612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL100_RS03715 (NCTC3168_00768) ychF 706222..707337 (-) 1116 WP_006595324.1 redox-regulated ATPase YchF -
  EL100_RS03720 (NCTC3168_00769) - 707401..707643 (+) 243 WP_232011416.1 DUF1307 domain-containing protein -
  EL100_RS03725 (NCTC3168_00770) - 707679..707870 (-) 192 WP_126403553.1 DUF951 domain-containing protein -
  EL100_RS03730 (NCTC3168_00771) dnaN 707934..709070 (-) 1137 WP_126403552.1 DNA polymerase III subunit beta -
  EL100_RS03735 (NCTC3168_00772) dnaA 709231..710601 (-) 1371 WP_126403551.1 chromosomal replication initiator protein DnaA -
  EL100_RS03740 (NCTC3168_00773) spo0J 710851..711612 (-) 762 WP_126405019.1 ParB/RepB/Spo0J family partition protein Regulator
  EL100_RS03745 (NCTC3168_00774) htrA 711678..712856 (-) 1179 WP_126405018.1 S1C family serine protease Regulator
  EL100_RS03750 (NCTC3168_00775) rlmH 713059..713538 (+) 480 WP_126405017.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL100_RS03760 (NCTC3168_00777) - 713898..714041 (+) 144 WP_126405016.1 bacteriocin -
  EL100_RS09760 (NCTC3168_00778) - 714041..715360 (+) 1320 WP_232011417.1 GHKL domain-containing protein -
  EL100_RS03770 (NCTC3168_00779) comE/comE2 715361..716113 (+) 753 WP_126405015.1 response regulator transcription factor Regulator

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29305.90 Da        Isoelectric Point: 8.3670

>NTDB_id=1120169 EL100_RS03740 WP_126405019.1 710851..711612(-) (spo0J) [Streptococcus australis strain NCTC3168]
MEKIDIIDVKQIRTNPFQPRQTFVQEKLEELAASIKENGLIQPIIVRKSPIVGYELLAGERRYRAAQIAGFKEIPAIIRE
LSDDDMIKQAIIENLQREDLNPIEEAESYQHLIDKGATHEEIAQFMGKSRPYISNMVRLLHLSPAVKEAIKNEQISQGHA
RILVPLKEDLQIYWLERILKEGLSVRSLEEKVGQKKKRPSKKEKELFLAQEENRLKKILGTEVEIHLTKQEKGSIHISFN
NLDEYQRIINSLK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=1120169 EL100_RS03740 WP_126405019.1 710851..711612(-) (spo0J) [Streptococcus australis strain NCTC3168]
ATGGAAAAAATTGATATTATTGACGTAAAGCAAATACGAACCAATCCTTTTCAACCTCGTCAAACCTTTGTACAAGAGAA
ATTAGAAGAACTCGCAGCCTCAATCAAAGAAAATGGATTAATCCAACCCATTATTGTTCGAAAATCTCCGATTGTTGGTT
ATGAACTACTTGCTGGAGAAAGACGCTACCGAGCAGCTCAAATAGCTGGTTTCAAAGAAATCCCAGCGATTATAAGAGAA
TTATCAGATGATGACATGATTAAACAAGCCATTATCGAAAATTTACAAAGAGAAGATTTGAATCCAATTGAAGAGGCCGA
ATCCTACCAACATCTTATTGATAAAGGGGCTACCCATGAAGAAATTGCTCAATTTATGGGAAAATCTCGGCCTTACATCA
GCAACATGGTCCGGTTGCTTCATCTCTCACCAGCTGTCAAAGAAGCAATCAAAAACGAGCAAATTTCACAAGGACATGCC
CGCATTTTAGTTCCCTTAAAGGAAGATCTACAAATCTATTGGCTGGAACGAATTCTGAAAGAAGGACTAAGCGTTCGTAG
TTTGGAAGAAAAGGTTGGTCAAAAAAAGAAAAGGCCAAGTAAAAAAGAGAAAGAACTCTTTTTAGCACAGGAAGAAAATA
GACTAAAAAAGATTCTAGGAACCGAAGTAGAAATCCATCTGACGAAACAAGAAAAAGGCAGTATCCATATTTCATTTAAC
AACCTTGATGAATACCAACGAATTATTAACAGTCTCAAATGA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

51.779

100

0.518

Multiple sequence alignment