Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   EL079_RS05740 Genome accession   NZ_LR134283
Coordinates   1176490..1178448 (-) Length   652 a.a.
NCBI ID   WP_003031106.1    Uniprot ID   A0A448AIQ4
Organism   Streptococcus anginosus strain NCTC10713     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1171490..1183448
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL079_RS05700 (NCTC10713_01184) - 1172260..1172625 (-) 366 WP_003031118.1 Asp23/Gls24 family envelope stress response protein -
  EL079_RS05705 (NCTC10713_01185) rpmB 1172801..1172989 (-) 189 WP_003025909.1 50S ribosomal protein L28 -
  EL079_RS05710 (NCTC10713_01186) - 1173124..1173786 (-) 663 WP_003031059.1 LiaF transmembrane domain-containing protein -
  EL079_RS05715 (NCTC10713_01187) - 1173792..1174238 (-) 447 WP_003031093.1 LytTR family DNA-binding domain-containing protein -
  EL079_RS05725 (NCTC10713_01189) - 1174579..1175040 (-) 462 WP_003031097.1 GNAT family N-acetyltransferase -
  EL079_RS05730 (NCTC10713_01190) - 1175138..1176019 (-) 882 WP_003025917.1 class II fructose-bisphosphate aldolase -
  EL079_RS05740 (NCTC10713_01192) amiA3 1176490..1178448 (-) 1959 WP_003031106.1 peptide ABC transporter substrate-binding protein Regulator
  EL079_RS05745 (NCTC10713_01193) mraY 1178974..1179957 (-) 984 WP_003031030.1 phospho-N-acetylmuramoyl-pentapeptide- transferase -
  EL079_RS05750 (NCTC10713_01194) pbp2X 1179959..1182214 (-) 2256 WP_018543631.1 penicillin-binding protein PBP2X -
  EL079_RS05755 (NCTC10713_01195) ftsL 1182218..1182538 (-) 321 WP_003031041.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72383.58 Da        Isoelectric Point: 7.3789

>NTDB_id=1120037 EL079_RS05740 WP_003031106.1 1176490..1178448(-) (amiA3) [Streptococcus anginosus strain NCTC10713]
MKSSKWIIATGVVLSAGILLSGCGKSASSTSTYSYVYTQDPDTLNYLMANRATTSDVVTNLVDGLLENDQYGNLVPALAK
SWTVSKDGLTYTYKLRKDAKWYTSEGEEYASVKAQDFVTGLKYAADNKSEALYLVQDSVKGLDAYIKGETKDFSTVGVKA
LDDYTVQYTLSRAETYWNSKTTNNILFPVNADFLKSQGKNFGSVKPTSILYNGPYLLKSLTAKSSMEFAKNPHYYDKKNV
HLDNIKLTYYDGSDQEALIRNFTDGAYSAARLYPNSSSFASVKKQYANNIIYSLQDATSYYYNFNLNRQSYNHTSKKTDA
QKAATQEAVLNKAFRQAINFAYNRTSYGAQSNGKDGATKVLRNTLVPPTFVSIGDKTFGDVVSSKLVNYGSEWSNMNLAD
AQDAYYNPEKAKAKFAQAKAELQAKGVQFPIHLDVPADQTSKIGVQWESSMKQSVESVLGTENVVIDIQQMSSDELNNIS
YFANTAAQKDYDLYNGGWSGDYQDPSTYLDTLNIKNGGSLQNFGLEPGQENDKIKAVGLDTYTEMLAEANAETNEATRYE
KYAEAQAWLIDSGLTMPNLSLGGTPSVTKTVPFSRSYSLVGIKGASSSYFKYVKLQDKIVTTKEYESAKKKWLKEKETSN
KKAQDDYENHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=1120037 EL079_RS05740 WP_003031106.1 1176490..1178448(-) (amiA3) [Streptococcus anginosus strain NCTC10713]
ATGAAATCATCAAAATGGATTATTGCAACAGGAGTTGTGCTAAGCGCTGGAATCCTATTATCAGGTTGTGGCAAGTCAGC
TTCTAGCACATCAACTTATTCATACGTGTATACACAAGATCCAGACACGCTAAATTATCTGATGGCGAACCGTGCGACAA
CTTCAGATGTTGTGACTAACTTAGTTGATGGATTATTGGAAAATGACCAGTACGGAAATTTAGTTCCGGCGCTTGCTAAG
TCATGGACAGTCTCCAAAGATGGCTTGACATATACGTATAAATTACGTAAAGATGCTAAATGGTACACATCAGAAGGTGA
AGAGTACGCAAGTGTAAAAGCGCAAGACTTTGTAACTGGCTTGAAATACGCCGCAGATAATAAATCAGAAGCCCTTTACC
TCGTTCAAGATTCTGTCAAAGGTTTAGATGCTTACATCAAGGGTGAAACGAAGGATTTTTCAACGGTTGGAGTAAAAGCT
CTAGATGACTATACAGTACAGTATACACTCAGCCGTGCAGAGACTTATTGGAATTCAAAAACGACCAATAATATCCTCTT
CCCAGTTAATGCAGATTTCTTGAAATCACAAGGAAAAAATTTTGGTTCTGTAAAACCAACCAGCATTCTATACAATGGTC
CTTATCTATTGAAGTCTCTGACAGCCAAGTCTTCTATGGAATTTGCTAAAAATCCTCATTACTATGATAAAAAGAATGTT
CATTTGGATAACATTAAATTGACATATTATGACGGCTCTGACCAAGAAGCCCTTATCCGTAACTTCACAGATGGTGCCTA
TAGTGCAGCTCGTCTTTATCCAAATAGCTCTAGTTTTGCTTCTGTTAAGAAACAATATGCTAACAATATCATTTATAGTT
TGCAAGATGCGACCAGCTACTATTATAACTTTAATTTAAATCGTCAGTCCTATAACCATACATCGAAGAAAACAGATGCT
CAAAAGGCTGCGACCCAAGAAGCGGTGCTAAATAAAGCTTTCCGTCAAGCTATCAACTTTGCCTATAATCGTACTTCTTA
TGGTGCACAAAGTAATGGGAAAGACGGAGCGACAAAGGTATTGCGGAACACACTCGTGCCACCAACATTTGTTTCTATCG
GTGATAAAACGTTTGGTGATGTTGTGTCTTCTAAGCTGGTAAACTATGGCTCAGAATGGTCAAACATGAATTTGGCCGAT
GCACAAGATGCTTATTACAATCCAGAAAAAGCTAAAGCAAAGTTTGCTCAAGCTAAAGCAGAACTGCAAGCAAAGGGTGT
TCAGTTTCCTATCCACTTAGATGTACCAGCTGATCAGACAAGTAAAATTGGTGTTCAATGGGAAAGTTCCATGAAACAAT
CTGTTGAGTCTGTCTTAGGCACAGAAAATGTTGTCATTGATATTCAACAAATGAGTTCAGATGAATTAAACAATATCAGT
TATTTTGCTAATACAGCTGCTCAAAAGGACTATGATTTGTATAATGGTGGTTGGTCTGGTGACTATCAAGACCCATCTAC
TTATCTAGATACTTTGAATATAAAAAATGGTGGTAGTTTGCAAAACTTTGGTCTGGAACCAGGTCAAGAAAATGATAAGA
TCAAGGCAGTTGGACTGGACACATATACAGAGATGCTAGCAGAAGCAAATGCTGAAACCAACGAAGCTACACGCTATGAA
AAATATGCCGAGGCGCAAGCATGGTTAATTGATAGTGGCTTGACAATGCCAAACCTCTCTCTTGGAGGAACACCATCTGT
GACGAAAACAGTTCCATTTAGCCGTTCTTATTCATTAGTTGGAATCAAAGGTGCTTCAAGCAGTTATTTCAAATATGTCA
AACTGCAAGACAAAATTGTAACAACAAAAGAATATGAAAGTGCTAAAAAGAAATGGCTAAAAGAAAAAGAAACCTCTAAT
AAAAAAGCGCAAGATGACTACGAAAATCATGTGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(74-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A448AIQ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

57.382

100

0.578
  amiA3 Streptococcus thermophilus LMG 18311

57.23

100

0.577
  amiA Streptococcus salivarius strain HSISS4

57.23

100

0.577

Multiple sequence alignment