Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EL079_RS05295 Genome accession   NZ_LR134283
Coordinates   1090094..1091149 (-) Length   351 a.a.
NCBI ID   WP_003032358.1    Uniprot ID   A0A3S4NJ72
Organism   Streptococcus anginosus strain NCTC10713     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1085094..1096149
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL079_RS05260 (NCTC10713_01098) - 1085542..1085922 (-) 381 WP_018543647.1 rhodanese-like domain-containing protein -
  EL079_RS05265 (NCTC10713_01099) - 1085916..1086140 (-) 225 WP_003025724.1 YqgQ family protein -
  EL079_RS05270 (NCTC10713_01100) - 1086414..1086941 (-) 528 WP_003032411.1 Dps family protein -
  EL079_RS05275 (NCTC10713_01101) cclA/cilC 1087095..1087769 (+) 675 WP_018543646.1 A24 family peptidase Machinery gene
  EL079_RS05280 (NCTC10713_01102) - 1087764..1088282 (-) 519 WP_003032357.1 VanZ family protein -
  EL079_RS05285 (NCTC10713_01103) rlmN 1088275..1089357 (-) 1083 WP_018543645.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  EL079_RS05290 (NCTC10713_01104) - 1089391..1089954 (-) 564 WP_026248195.1 YutD family protein -
  EL079_RS05295 (NCTC10713_01105) sepM 1090094..1091149 (-) 1056 WP_003032358.1 SepM family pheromone-processing serine protease Regulator
  EL079_RS05300 (NCTC10713_01106) coaD 1091130..1091627 (-) 498 WP_003032432.1 pantetheine-phosphate adenylyltransferase -
  EL079_RS05305 (NCTC10713_01107) rsmD 1091617..1092165 (-) 549 WP_025271932.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EL079_RS05310 (NCTC10713_01108) hpf 1092353..1092895 (-) 543 WP_003032381.1 ribosome hibernation-promoting factor, HPF/YfiA family -
  EL079_RS05315 (NCTC10713_01109) comFC/cflB 1092973..1093638 (-) 666 WP_003032902.1 ComF family protein Machinery gene
  EL079_RS05320 (NCTC10713_01110) comFA/cflA 1093635..1094936 (-) 1302 WP_022524394.1 DEAD/DEAH box helicase Machinery gene
  EL079_RS05325 (NCTC10713_01111) - 1094993..1095628 (+) 636 WP_003032900.1 YigZ family protein -

Sequence


Protein


Download         Length: 351 a.a.        Molecular weight: 38306.34 Da        Isoelectric Point: 10.2305

>NTDB_id=1120030 EL079_RS05295 WP_003032358.1 1090094..1091149(-) (sepM) [Streptococcus anginosus strain NCTC10713]
MEKPRNKFKKWPIIAVVGLILLFLSFVVPLPYYIEVPGGAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDITLKYLGVYVLQVTKNSTFKGILNIAGTVTGVN
DKTFNSSKDLIDYVGSQKIGSKVKVNYVEDGQKKSAIGKIIKLENGKNGIGISLIDRTEVTSNIPIEFSTAGIGGPSAGL
MFSLAIYTQIADPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEVKKSNPKAKTNYETAL
AAAKKIKTKMKIVPVKTLQDAIDYLKSTKKS

Nucleotide


Download         Length: 1056 bp        

>NTDB_id=1120030 EL079_RS05295 WP_003032358.1 1090094..1091149(-) (sepM) [Streptococcus anginosus strain NCTC10713]
ATGGAAAAACCAAGAAATAAATTTAAAAAATGGCCGATAATTGCAGTAGTAGGGTTGATTTTGCTTTTCTTATCTTTTGT
AGTTCCCTTGCCTTATTATATTGAGGTGCCAGGTGGTGCAGCGGATGTCCGTCAGGTATTGCGCGTGGACAACAAAGAAG
ATAAGGAAAAAGGTTCTTATAATTTTGTAACGGTTGGAATTCAGCATGCGACCTTTGCTCATTTGGTTTATGCTTGGCTG
ACTCCTTTTACGGATATTTATTCGGCGAAAGATTTGACTGGTGGAACTTCTGATAAAGAATACATGCGGATCAATCAGTT
TTATATGGAAACGTCGCAAAACCTAGCTAAATACCAAGGGTTGAAAAAAGCTGGCAAAGACATTACTCTGAAATATCTAG
GGGTTTACGTCTTGCAAGTCACAAAGAATTCTACTTTTAAAGGTATTTTAAATATTGCAGGTACCGTGACAGGCGTGAAT
GATAAGACTTTCAACAGTTCAAAAGATTTGATTGATTATGTAGGCTCACAGAAAATTGGCAGCAAGGTCAAGGTGAACTA
TGTAGAAGACGGTCAGAAAAAATCTGCTATAGGTAAAATTATCAAACTTGAAAATGGAAAAAATGGGATTGGTATTAGCT
TAATTGACCGAACAGAAGTCACAAGTAATATACCAATTGAATTTTCAACAGCAGGGATTGGTGGACCAAGTGCGGGCTTG
ATGTTTAGCTTGGCTATTTATACACAGATTGCAGACCCGACATTGAGAGATGGCAGAAATATTGCTGGGACAGGATCGAT
TGACCGTGAAGGAAAAGTTGGTGATATTGGTGGGATTGATAAAAAAGTTGTTTCAGCAGCTAAAAATGGCGCAGAAATTT
TCTTTGCGCCAAATAATCCAGTCACCAAGGAAGTGAAAAAATCCAATCCTAAAGCGAAAACAAATTATGAGACAGCTTTG
GCAGCTGCTAAAAAAATTAAAACTAAAATGAAAATTGTACCTGTCAAGACCTTGCAAGACGCAATTGATTACCTCAAAAG
CACGAAAAAGTCGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3S4NJ72

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

63.93

97.151

0.621


Multiple sequence alignment