Detailed information    

insolico Bioinformatically predicted

Overview


Name   cclA/cilC   Type   Machinery gene
Locus tag   EL079_RS05275 Genome accession   NZ_LR134283
Coordinates   1087095..1087769 (+) Length   224 a.a.
NCBI ID   WP_018543646.1    Uniprot ID   A0A448AIB9
Organism   Streptococcus anginosus strain NCTC10713     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1082095..1092769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL079_RS05245 (NCTC10713_01095) - 1082428..1082712 (-) 285 WP_003025714.1 DUF3165 family protein -
  EL079_RS05250 (NCTC10713_01096) typA 1082777..1084618 (-) 1842 WP_003032385.1 translational GTPase TypA -
  EL079_RS05255 (NCTC10713_01097) - 1084796..1085521 (+) 726 WP_003032391.1 pseudouridine synthase -
  EL079_RS05260 (NCTC10713_01098) - 1085542..1085922 (-) 381 WP_018543647.1 rhodanese-like domain-containing protein -
  EL079_RS05265 (NCTC10713_01099) - 1085916..1086140 (-) 225 WP_003025724.1 YqgQ family protein -
  EL079_RS05270 (NCTC10713_01100) - 1086414..1086941 (-) 528 WP_003032411.1 Dps family protein -
  EL079_RS05275 (NCTC10713_01101) cclA/cilC 1087095..1087769 (+) 675 WP_018543646.1 A24 family peptidase Machinery gene
  EL079_RS05280 (NCTC10713_01102) - 1087764..1088282 (-) 519 WP_003032357.1 VanZ family protein -
  EL079_RS05285 (NCTC10713_01103) rlmN 1088275..1089357 (-) 1083 WP_018543645.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  EL079_RS05290 (NCTC10713_01104) - 1089391..1089954 (-) 564 WP_026248195.1 YutD family protein -
  EL079_RS05295 (NCTC10713_01105) sepM 1090094..1091149 (-) 1056 WP_003032358.1 SepM family pheromone-processing serine protease Regulator
  EL079_RS05300 (NCTC10713_01106) coaD 1091130..1091627 (-) 498 WP_003032432.1 pantetheine-phosphate adenylyltransferase -
  EL079_RS05305 (NCTC10713_01107) rsmD 1091617..1092165 (-) 549 WP_025271932.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 25185.47 Da        Isoelectric Point: 8.3081

>NTDB_id=1120029 EL079_RS05275 WP_018543646.1 1087095..1087769(+) (cclA/cilC) [Streptococcus anginosus strain NCTC10713]
MIHFYFFLVGSIVASFLGLVVDRFPEQSILVPSSHCNACGQKLAPRDLVPVLSQLINRLRCRFCNSKIPIRYILLELTGG
CLFLATSLGYLNINRLVLLAMGMTLSLYDQREQEYPLLIWLIFHIFLLFLTSFNLLMVAFLALGILAHFVDLRIGAGDFL
FLASCSTIFHLTEVLLIIQIASIIGLLLFGLKSKKDRLAFVPCLFCGSSILIMIQFIVLHQNAL

Nucleotide


Download         Length: 675 bp        

>NTDB_id=1120029 EL079_RS05275 WP_018543646.1 1087095..1087769(+) (cclA/cilC) [Streptococcus anginosus strain NCTC10713]
ATGATTCATTTTTATTTTTTCTTGGTTGGAAGCATTGTAGCTTCCTTTTTAGGGCTGGTCGTTGATCGTTTCCCTGAACA
GTCTATTCTCGTTCCTTCCAGTCATTGTAATGCTTGTGGACAGAAATTAGCACCTCGTGATTTAGTCCCTGTCCTTTCTC
AGCTTATCAATCGACTGCGTTGTCGGTTTTGCAACTCAAAAATTCCCATCCGTTACATCCTTCTAGAACTAACTGGTGGC
TGTCTCTTTCTTGCAACATCTTTAGGTTATCTAAACATCAACCGGCTCGTTTTGCTTGCAATGGGAATGACCTTATCCCT
TTATGATCAAAGAGAACAAGAATATCCTCTCCTCATCTGGTTAATCTTTCATATTTTTCTCCTTTTTTTGACAAGCTTCA
ATCTTTTAATGGTTGCTTTTTTAGCACTTGGGATTTTGGCTCACTTCGTTGATTTACGTATCGGTGCAGGAGACTTTCTT
TTTCTGGCATCTTGCTCAACTATTTTTCATCTGACTGAAGTTCTTCTCATTATTCAAATTGCTAGTATCATTGGTCTGCT
CCTTTTTGGTTTAAAATCAAAAAAAGACAGGTTAGCCTTTGTTCCCTGTCTTTTCTGTGGTAGCAGCATCCTGATAATGA
TACAATTTATCGTTCTTCACCAAAATGCCTTATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A448AIB9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

57.075

94.643

0.54

  cclA/cilC Streptococcus mitis NCTC 12261

56.604

94.643

0.536

  cclA/cilC Streptococcus pneumoniae TIGR4

56.132

94.643

0.531

  cclA/cilC Streptococcus pneumoniae Rx1

55.66

94.643

0.527

  cclA/cilC Streptococcus pneumoniae D39

55.66

94.643

0.527

  cclA/cilC Streptococcus pneumoniae R6

55.66

94.643

0.527


Multiple sequence alignment