Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   EL079_RS04155 Genome accession   NZ_LR134283
Coordinates   842925..843929 (-) Length   334 a.a.
NCBI ID   WP_003032767.1    Uniprot ID   A0A448AHT0
Organism   Streptococcus anginosus strain NCTC10713     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 837925..848929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL079_RS04135 (NCTC10713_00870) micA 839069..839770 (-) 702 WP_003025150.1 response regulator YycF Regulator
  EL079_RS04140 (NCTC10713_00871) - 840064..840405 (-) 342 WP_003032667.1 hypothetical protein -
  EL079_RS04145 (NCTC10713_00872) - 840432..841745 (-) 1314 WP_003032712.1 glycosyltransferase family 4 protein -
  EL079_RS04150 (NCTC10713_00873) - 841747..842745 (-) 999 WP_022524413.1 glycosyltransferase family 4 protein -
  EL079_RS04155 (NCTC10713_00874) ccpA 842925..843929 (-) 1005 WP_003032767.1 catabolite control protein A Regulator
  EL079_RS04160 (NCTC10713_00875) - 844193..845275 (+) 1083 WP_003032737.1 Xaa-Pro peptidase family protein -
  EL079_RS04165 (NCTC10713_00876) - 845645..848104 (-) 2460 WP_018543453.1 LTA synthase family protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36981.05 Da        Isoelectric Point: 6.1712

>NTDB_id=1120020 EL079_RS04155 WP_003032767.1 842925..843929(-) (ccpA) [Streptococcus anginosus strain NCTC10713]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFA
TLAKGIDDIAEMYKYNIVLANSDEDDNKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVERLTKNNQKIAFVSGPLVDDINGKIRLAGYKEALKKAKLTYSEGLVFESKYSYDDGYQLAERVIASK
ATAAFVTGDELAAGLLNGLSDKGVNVPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1120020 EL079_RS04155 WP_003032767.1 842925..843929(-) (ccpA) [Streptococcus anginosus strain NCTC10713]
ATGAACACAGACGATACAGTAACCATTTATGATGTCGCGCGTGAAGCGGGAGTTTCAATGGCAACCGTTAGCCGTGTGGT
AAATGGAAATAAAAATGTAAAGGAAAATACAAGAAAAAAAGTCTTGGAAGTGATTGACCGCTTGGATTACCGACCAAATG
CGGTAGCGCGTGGTCTTGCTAGCAAAAAGACGACGACTGTTGGAGTTGTCATTCCAAATATCACAAGCAGTTATTTTGCA
ACGCTTGCAAAAGGGATTGACGACATTGCAGAGATGTATAAATACAATATTGTTTTAGCAAATAGTGATGAAGATGATAA
CAAGGAAGTTTCTGTTGTCAATACTCTGTTCTCAAAACAAGTAGATGGTATCATTTTTATGGGCTATCATTTGACAGAAA
AGATTCGCTCCGAGTTTTCTCGTTCGCGGACGCCAGTTGTGCTTGCAGGTACAGTTGATGTCGAGCATCAATTGCCAAGT
GTGAATATTGATTACAAACAAGCAACTATAGATGCAGTTGAACGCCTTACGAAAAATAATCAAAAAATTGCTTTTGTAAG
CGGACCTTTGGTGGATGATATCAATGGTAAGATTCGTTTAGCAGGCTACAAAGAAGCTTTGAAGAAAGCTAAACTTACTT
ATAGTGAAGGATTGGTTTTTGAGTCAAAATATAGCTATGATGATGGTTATCAATTAGCAGAACGGGTCATTGCTTCTAAA
GCTACAGCAGCTTTTGTGACTGGTGATGAGCTGGCGGCTGGGCTGTTAAATGGTTTATCAGACAAGGGTGTAAATGTACC
AGAAGATTTTGAAATCATCACTAGCGATGATTCGCAGGTAGCACGCTTCACTCGTCCAAATTTGACAACTATTGGTCAAC
CTTTGTATGACCTTGGTGCAATTAGTATGCGCATGCTGACTAAGATTATGCACAAGGAAGAGCTGGAAGAACGCGAAGTA
GTATTAGCTCATGGTCTTATTGAGCGCCGTTCAACAAGAAAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A448AHT0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

90.12

100

0.901
  ccpA Streptococcus pneumoniae D39

88.922

100

0.889
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.006

99.102

0.575

Multiple sequence alignment