Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | EL078_RS00725 | Genome accession | NZ_LR134282 |
| Coordinates | 105751..106707 (+) | Length | 318 a.a. |
| NCBI ID | WP_024344497.1 | Uniprot ID | A0A239RCI2 |
| Organism | Streptococcus equinus strain NCTC8140 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 100751..111707
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL078_RS00685 (NCTC8140_00136) | - | 101645..102013 (+) | 369 | WP_021141429.1 | DUF1033 family protein | - |
| EL078_RS00690 (NCTC8140_00137) | comYA | 102082..103023 (+) | 942 | WP_027968018.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EL078_RS00695 (NCTC8140_00138) | comYB | 102947..103990 (+) | 1044 | WP_164554342.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EL078_RS00700 (NCTC8140_00139) | comYC | 103990..104292 (+) | 303 | WP_021141433.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EL078_RS00705 (NCTC8140_00140) | comGD | 104267..104707 (+) | 441 | WP_126437530.1 | competence type IV pilus minor pilin ComGD | - |
| EL078_RS00710 (NCTC8140_00141) | comGE | 104661..104954 (+) | 294 | WP_039697664.1 | competence type IV pilus minor pilin ComGE | - |
| EL078_RS00715 (NCTC8140_00142) | comYF | 104938..105375 (+) | 438 | WP_126437531.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EL078_RS00720 (NCTC8140_00143) | comGG | 105362..105697 (+) | 336 | WP_003067902.1 | competence type IV pilus minor pilin ComGG | - |
| EL078_RS00725 (NCTC8140_00144) | comYH | 105751..106707 (+) | 957 | WP_024344497.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EL078_RS00730 (NCTC8140_00145) | - | 106761..107960 (+) | 1200 | WP_045798327.1 | acetate kinase | - |
| EL078_RS00735 (NCTC8140_00146) | - | 108118..108315 (+) | 198 | WP_021141442.1 | helix-turn-helix transcriptional regulator | - |
| EL078_RS00740 (NCTC8140_00147) | - | 108370..108822 (+) | 453 | WP_126437532.1 | ABC transporter permease | - |
| EL078_RS00745 (NCTC8140_00148) | - | 108834..109469 (+) | 636 | WP_027968028.1 | CPBP family intramembrane glutamic endopeptidase | - |
| EL078_RS00750 (NCTC8140_00149) | proC | 109521..110291 (-) | 771 | WP_024344501.1 | pyrroline-5-carboxylate reductase | - |
| EL078_RS00755 (NCTC8140_00150) | pepA | 110353..111420 (-) | 1068 | WP_024344502.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35783.86 Da Isoelectric Point: 4.4780
>NTDB_id=1119953 EL078_RS00725 WP_024344497.1 105751..106707(+) (comYH) [Streptococcus equinus strain NCTC8140]
MNFENIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGASEVVAANNEKLRQLNLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFVQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEGHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPESIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIDKFKKWNVENMIF
MNFENIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGASEVVAANNEKLRQLNLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFVQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEGHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPESIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIDKFKKWNVENMIF
Nucleotide
Download Length: 957 bp
>NTDB_id=1119953 EL078_RS00725 WP_024344497.1 105751..106707(+) (comYH) [Streptococcus equinus strain NCTC8140]
ATGAATTTTGAAAATATCGAAACAGCCTATGGGTTGATTCTTGAAAATATACAATTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCACTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAGGGTGCCAGTGAAGTTGTAGCTGCAAATAATG
AGAAACTACGCCAACTTAACTTAACTAAGGAAGAATGGCGCCGTGCTTTTCAGTTTATCTTTATTAAAGCTGCGCAAACA
GAAGCTCTTCAGGCAAATCACCAATTTACACCTGATGCTATTGGCTTCATTTTAATGTTCCTCATTGAGAATTTGACAGC
TTCTAAGGAACTTGATGTTTTGGAAATCGGTAGCGGAACAGGTAACCTTGCCCAAACGTTGTTGAACAACTCATCTAAAG
ACCTAAACTATCTAGGGATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATCGCTGAAGTTATGGATTCTAAA
GCTCAATTCGTTCAAGAAGATGCTGTACGCCCACAGATTCTTAAGGAAAGTGATGTCATCATCAGTGACCTTCCAGTCGG
ATTCTATCCAAATGATGAAATTGCAAAACGTTACAAAGTAGCTAGCAGTGAAGGGCACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTTAAATATCTCAAAAAAGACGGGATTGCTGTCTTTTTAGCACCAGTTAGTCTTTTGACAAGTAAGCAA
AGTGACCTGTTGAAAGCATGGTTGAAGGATTATGCTGATGTGATTGCTGTAATTACTTTGCCAGAATCTATCTTTGGAAA
TGCAGCCAACGCGAAATCAATTTTCGTTTTGAAAAAACAAGCTGAACATACTCCAGAAACCTTTGTTTATCCACTTGCTG
ACTTGCAAAGTCGAGAAGTGTTGACAGACTTCATTGATAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA
ATGAATTTTGAAAATATCGAAACAGCCTATGGGTTGATTCTTGAAAATATACAATTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCACTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAGGGTGCCAGTGAAGTTGTAGCTGCAAATAATG
AGAAACTACGCCAACTTAACTTAACTAAGGAAGAATGGCGCCGTGCTTTTCAGTTTATCTTTATTAAAGCTGCGCAAACA
GAAGCTCTTCAGGCAAATCACCAATTTACACCTGATGCTATTGGCTTCATTTTAATGTTCCTCATTGAGAATTTGACAGC
TTCTAAGGAACTTGATGTTTTGGAAATCGGTAGCGGAACAGGTAACCTTGCCCAAACGTTGTTGAACAACTCATCTAAAG
ACCTAAACTATCTAGGGATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATCGCTGAAGTTATGGATTCTAAA
GCTCAATTCGTTCAAGAAGATGCTGTACGCCCACAGATTCTTAAGGAAAGTGATGTCATCATCAGTGACCTTCCAGTCGG
ATTCTATCCAAATGATGAAATTGCAAAACGTTACAAAGTAGCTAGCAGTGAAGGGCACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTTAAATATCTCAAAAAAGACGGGATTGCTGTCTTTTTAGCACCAGTTAGTCTTTTGACAAGTAAGCAA
AGTGACCTGTTGAAAGCATGGTTGAAGGATTATGCTGATGTGATTGCTGTAATTACTTTGCCAGAATCTATCTTTGGAAA
TGCAGCCAACGCGAAATCAATTTTCGTTTTGAAAAAACAAGCTGAACATACTCCAGAAACCTTTGTTTATCCACTTGCTG
ACTTGCAAAGTCGAGAAGTGTTGACAGACTTCATTGATAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
68.987 |
99.371 |
0.686 |
| comYH | Streptococcus mutans UA159 |
68.671 |
99.371 |
0.682 |