Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   LOA_RS03720 Genome accession   NZ_CP004006
Coordinates   748665..749324 (+) Length   219 a.a.
NCBI ID   WP_025385195.1    Uniprot ID   W0BDB6
Organism   Legionella oakridgensis ATCC 33761 = DSM 21215     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 743665..754324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOA_RS03695 (Loa_00821) - 744274..745371 (+) 1098 WP_025385058.1 IS4 family transposase -
  LOA_RS03700 (Loa_00822) - 745460..745888 (+) 429 WP_025385191.1 hypothetical protein -
  LOA_RS03705 (Loa_00823) comFC 745969..746682 (-) 714 WP_237757968.1 ComF family protein Machinery gene
  LOA_RS03710 (Loa_00824) bioC 746786..747655 (+) 870 WP_025385193.1 malonyl-ACP O-methyltransferase BioC -
  LOA_RS03715 (Loa_00825) phhA 747692..748510 (+) 819 WP_025385194.1 phenylalanine 4-monooxygenase -
  LOA_RS03720 (Loa_00826) letA 748665..749324 (+) 660 WP_025385195.1 two-component system response regulator LetA Regulator
  LOA_RS03725 (Loa_00827) uvrC 749661..751502 (+) 1842 WP_025385196.1 excinuclease ABC subunit UvrC -
  LOA_RS03730 (Loa_00829) - 751789..752532 (+) 744 WP_025385197.1 L,D-transpeptidase -
  LOA_RS03735 (Loa_00830) - 752529..753074 (+) 546 WP_035893339.1 hypothetical protein -

Sequence


Protein


Download         Length: 219 a.a.        Molecular weight: 24554.90 Da        Isoelectric Point: 6.4972

>NTDB_id=111991 LOA_RS03720 WP_025385195.1 748665..749324(+) (letA) [Legionella oakridgensis ATCC 33761 = DSM 21215]
MIKVLIVDDHALVRMGIRRLLEDLPDVDVVGEAESGEVALTLVKACKPDVVLLDMKMPGIDGWEVTRRLKKSNPQVKVIA
VTAVCAEPLPTRVLQLGAMGYLTKESGIEEMAAAIRKVHKGEKYLSAEIAQKMAINSLQAPQESPFDLLSEREMQVMLMI
TSGMTVQDIADRLFLSSKTINGYRYRIFEKLVIKNDVELTYLAMKHRVIEQPHNPLKDE

Nucleotide


Download         Length: 660 bp        

>NTDB_id=111991 LOA_RS03720 WP_025385195.1 748665..749324(+) (letA) [Legionella oakridgensis ATCC 33761 = DSM 21215]
TTGATAAAAGTATTAATTGTTGATGACCATGCTTTGGTGCGAATGGGTATTCGACGATTATTGGAAGATTTGCCCGACGT
AGATGTTGTTGGAGAAGCGGAAAGTGGTGAGGTTGCCTTAACATTAGTGAAAGCATGCAAGCCCGATGTGGTGTTGCTGG
ACATGAAAATGCCCGGCATCGATGGTTGGGAAGTGACCAGACGTCTTAAGAAGTCTAATCCTCAGGTAAAGGTTATCGCT
GTAACCGCAGTGTGCGCTGAGCCATTGCCGACTCGGGTTTTGCAATTAGGTGCCATGGGGTATCTGACTAAAGAGTCCGG
GATAGAAGAAATGGCGGCAGCTATTCGTAAGGTACATAAAGGTGAAAAGTATTTAAGTGCTGAAATTGCCCAGAAAATGG
CAATCAATAGTCTACAAGCCCCTCAGGAGTCCCCCTTTGATCTGCTGTCTGAACGGGAAATGCAAGTGATGTTGATGATA
ACCAGTGGTATGACCGTTCAGGATATTGCTGATCGATTATTTCTCAGTAGCAAGACAATTAATGGTTATCGTTATCGTAT
CTTCGAGAAGCTGGTGATTAAAAATGATGTTGAGCTTACTTATCTCGCTATGAAGCATCGAGTCATAGAGCAACCGCATA
ACCCATTAAAGGATGAGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB W0BDB6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

85.845

100

0.858

  letA Legionella pneumophila strain ERS1305867

85.845

100

0.858


Multiple sequence alignment