Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrR   Type   Regulator
Locus tag   EL076_RS02360 Genome accession   NZ_LR134275
Coordinates   430759..431202 (+) Length   147 a.a.
NCBI ID   WP_003095436.1    Uniprot ID   A0A3E4XIW1
Organism   Streptococcus vestibularis strain NCTC12167     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 425759..436202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL076_RS02335 (NCTC12167_00468) - 425822..426325 (-) 504 WP_003095580.1 HdeD family acid-resistance protein -
  EL076_RS02340 (NCTC12167_00469) - 426394..427155 (-) 762 WP_003095637.1 NUDIX hydrolase -
  EL076_RS02345 (NCTC12167_00470) - 427219..428325 (-) 1107 WP_003095574.1 AAA family ATPase -
  EL076_RS02350 (NCTC12167_00471) gdhA 428671..430023 (+) 1353 WP_003095495.1 NADP-specific glutamate dehydrogenase -
  EL076_RS02355 (NCTC12167_00472) - 430161..430571 (+) 411 WP_003095646.1 peptide deformylase -
  EL076_RS02360 (NCTC12167_00473) rcrR 430759..431202 (+) 444 WP_003095436.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  EL076_RS02365 (NCTC12167_00474) rcrP 431206..433020 (+) 1815 WP_003095656.1 ABC transporter ATP-binding protein Regulator
  EL076_RS02370 (NCTC12167_00475) rcrQ 433010..434788 (+) 1779 WP_003095558.1 ABC transporter ATP-binding protein Regulator
  EL076_RS02375 - 434945..435130 (+) 186 WP_037621567.1 hypothetical protein -
  EL076_RS02380 (NCTC12167_00476) - 435538..436161 (+) 624 WP_003095383.1 GTP pyrophosphokinase family protein -

Sequence


Protein


Download         Length: 147 a.a.        Molecular weight: 17175.51 Da        Isoelectric Point: 6.9936

>NTDB_id=1119876 EL076_RS02360 WP_003095436.1 430759..431202(+) (rcrR) [Streptococcus vestibularis strain NCTC12167]
MHGKDPFSEFREFINTMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKRLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGEKKAQDVGYFREAIHEQLLDGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=1119876 EL076_RS02360 WP_003095436.1 430759..431202(+) (rcrR) [Streptococcus vestibularis strain NCTC12167]
ATGCATGGGAAAGATCCTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTGGGTAAAGC
GTATGGTGTTGAGCATTTAGCTGGCCCGCAAGGATTTGCTGTCAGGTACTTGTTTGAGAATCAAGATAAAGAAATATTTA
TCAAAGATATTGAGAAAAGACTATCTATTTCCAAGTCAGTGGCTAGTAATTTGGTCAAACGTATGGAGAAAAATGGTTTT
GTTGAATTGGTGACATCTGACAAGGACAAACGCTACAAGTATGTTCATCTGACAGACTTGGGTGAAAAGAAGGCCCAAGA
TGTCGGATATTTCCGAGAGGCTATCCATGAACAGTTGTTAGATGGTATTTCGAAAGAAGATGCTGAAACAGCTTTTCGAG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains


Predicted by InterproScan.

(42-91)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3E4XIW1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

57.447

95.918

0.551


Multiple sequence alignment