Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   EL077_RS07050 Genome accession   NZ_LR134273
Coordinates   1506327..1507328 (-) Length   333 a.a.
NCBI ID   WP_012516008.1    Uniprot ID   A1E373
Organism   Streptococcus equi subsp. equi strain NCTC12091     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1501327..1512328
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL077_RS07035 (NCTC12091_01431) - 1502163..1503497 (-) 1335 WP_012679857.1 glycosyltransferase family 4 protein -
  EL077_RS07040 (NCTC12091_01432) - 1503499..1504497 (-) 999 WP_126436925.1 glycosyltransferase family 4 protein -
  EL077_RS07045 (NCTC12091_01433) - 1504782..1506257 (-) 1476 WP_126436927.1 alpha-amylase -
  EL077_RS07050 (NCTC12091_01434) ccpA 1506327..1507328 (-) 1002 WP_012516008.1 catabolite control protein A Regulator
  EL077_RS07055 (NCTC12091_01435) - 1507502..1508587 (+) 1086 WP_043052266.1 M24 family metallopeptidase -
  EL077_RS07060 (NCTC12091_01436) - 1508761..1510344 (-) 1584 WP_126436929.1 ABC transporter ATP-binding protein -
  EL077_RS09990 (NCTC12091_01437) - 1510346..1510480 (-) 135 WP_258165016.1 hypothetical protein -
  EL077_RS07065 (NCTC12091_01438) - 1510560..1511303 (+) 744 WP_337660746.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36631.75 Da        Isoelectric Point: 5.7642

>NTDB_id=1119765 EL077_RS07050 WP_012516008.1 1506327..1507328(-) (ccpA) [Streptococcus equi subsp. equi strain NCTC12091]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1119765 EL077_RS07050 WP_012516008.1 1506327..1507328(-) (ccpA) [Streptococcus equi subsp. equi strain NCTC12091]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAATGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTTGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATCCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATCGTTCTTGCTTCAAGCGATGAGGACGACGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTTGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGGGCAGAGTTTTCTCGTTCGCGTACGCCAATTGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGACATTTTAGCTAAAGACCACCAAAGCATTGCCTTTGTTTC
AGGGCCGCTCATTGATGATATCAATGGAAAGGTGCGTTTGGCTGGCTACAAGGACGGACTCAAGAAGAACAAGCTTGATT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCCTATAAGGAAGGCTTTGAGCTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGCAAGCGTGTTCC
AGAAGACTTTGAGATTATCACAAGCAATGATTCTCCAGTCGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGCCAGC
CGGTCTATGACTTGGGGGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A1E373

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547

Multiple sequence alignment