Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   EL077_RS04805 Genome accession   NZ_LR134273
Coordinates   1019634..1020371 (+) Length   245 a.a.
NCBI ID   WP_111692437.1    Uniprot ID   -
Organism   Streptococcus equi subsp. equi strain NCTC12091     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1014634..1025371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL077_RS04775 (NCTC12091_00971) - 1015091..1015996 (-) 906 WP_043025804.1 diacylglycerol/lipid kinase family protein -
  EL077_RS04780 (NCTC12091_00972) trhA 1016106..1016756 (-) 651 WP_012515586.1 PAQR family membrane homeostasis protein TrhA -
  EL077_RS04785 (NCTC12091_00973) - 1016740..1017195 (-) 456 WP_037578258.1 DUF1836 domain-containing protein -
  EL077_RS04790 (NCTC12091_00974) - 1017455..1018210 (+) 756 WP_126436661.1 class I SAM-dependent methyltransferase -
  EL077_RS04795 (NCTC12091_00975) - 1018238..1018576 (+) 339 WP_126436663.1 cupin domain-containing protein -
  EL077_RS04800 (NCTC12091_00976) - 1018578..1018883 (+) 306 WP_012677981.1 AraC family ligand binding domain-containing protein -
  EL077_RS04805 (NCTC12091_00977) comE/blpR 1019634..1020371 (+) 738 WP_111692437.1 response regulator transcription factor Regulator
  EL077_RS04810 (NCTC12091_00978) - 1020741..1020941 (+) 201 WP_042670621.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  EL077_RS04815 (NCTC12091_00979) - 1021008..1021862 (+) 855 WP_126437211.1 ABC transporter ATP-binding protein -
  EL077_RS09930 (NCTC12091_00980) - 1021868..1022491 (+) 624 WP_337660730.1 hypothetical protein -
  EL077_RS09935 (NCTC12091_00981) - 1022503..1023021 (+) 519 WP_337660731.1 hypothetical protein -
  EL077_RS04825 (NCTC12091_00982) - 1023283..1023513 (+) 231 WP_111692439.1 Blp family class II bacteriocin -
  EL077_RS04835 (NCTC12091_00983) - 1024306..1024986 (+) 681 WP_228269169.1 thioredoxin family protein -
  EL077_RS09940 - 1025027..1025158 (+) 132 WP_228269170.1 LPXTG cell wall anchor domain-containing protein -

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 28904.32 Da        Isoelectric Point: 7.8796

>NTDB_id=1119756 EL077_RS04805 WP_111692437.1 1019634..1020371(+) (comE/blpR) [Streptococcus equi subsp. equi strain NCTC12091]
MNIFILEDDLGQQFRLEMKIQEILDKHHWTCDRFEVYGKPHQLLANVTERGRHQLFFLDSQIRNDEKKGLAVAREIRKRD
PYALIVFVTTHSELMPVSFRYQVSALDFIDKELSMKHFSDRIERAIIYAYEEQENVTSEGLFIFVTAKAQVQVPFSSLLF
IETSSTPHKLILYSQNERIEFYGFLSEVLKQDPRLVQCHRSYVINPYNVSFLDRDKRLLYFKNGQSCMVSRLKMKALEAS
IKALH

Nucleotide


Download         Length: 738 bp        

>NTDB_id=1119756 EL077_RS04805 WP_111692437.1 1019634..1020371(+) (comE/blpR) [Streptococcus equi subsp. equi strain NCTC12091]
ATGAATATTTTTATTCTCGAAGATGATCTAGGCCAACAGTTTAGGCTTGAGATGAAGATTCAAGAGATATTGGATAAGCA
TCACTGGACGTGTGATCGTTTTGAAGTTTATGGAAAGCCCCATCAGCTTCTGGCAAATGTTACAGAGAGAGGCAGGCATC
AGCTTTTCTTTCTCGATAGTCAAATTCGAAATGATGAGAAAAAGGGCTTAGCTGTTGCTCGTGAGATTAGAAAGCGTGAC
CCTTACGCTCTCATTGTTTTTGTCACGACACATTCTGAGCTTATGCCAGTTTCTTTTCGTTATCAGGTGTCTGCTCTAGA
TTTTATCGATAAGGAATTGTCAATGAAACATTTCTCAGATAGGATTGAAAGAGCCATTATATATGCTTATGAAGAGCAAG
AAAATGTAACCTCAGAGGGCTTATTTATTTTTGTAACGGCTAAGGCTCAGGTGCAGGTTCCTTTTTCAAGCCTATTGTTC
ATTGAGACCTCTAGTACTCCTCACAAGTTGATTTTGTATTCTCAAAACGAGCGAATAGAATTTTATGGCTTTCTTTCAGA
GGTTCTTAAGCAAGATCCCAGACTAGTCCAATGTCATCGTTCTTATGTTATCAATCCTTACAATGTTTCGTTTCTTGATC
GTGATAAGCGTTTACTCTATTTCAAGAATGGGCAGTCTTGCATGGTTTCAAGACTAAAAATGAAAGCACTTGAGGCGTCT
ATTAAGGCTTTGCATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

54.132

98.776

0.535

  comE/comE1 Streptococcus equinus JB1

45.041

98.776

0.445

  comE/comE2 Streptococcus equinus JB1

36.885

99.592

0.367


Multiple sequence alignment