Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   EL071_RS08920 Genome accession   NZ_LR134265
Coordinates   1737056..1738060 (-) Length   334 a.a.
NCBI ID   WP_001090621.1    Uniprot ID   A0A0E1EL27
Organism   Streptococcus agalactiae strain NCTC8184     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1732056..1743060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL071_RS08905 (NCTC8184_01772) - 1733079..1734413 (-) 1335 WP_001219475.1 glycosyltransferase family 4 protein -
  EL071_RS08910 (NCTC8184_01773) - 1734415..1735413 (-) 999 WP_000866349.1 glycosyltransferase -
  EL071_RS08915 (NCTC8184_01774) - 1735458..1736924 (-) 1467 WP_000180587.1 alpha-amylase -
  EL071_RS08920 (NCTC8184_01775) ccpA 1737056..1738060 (-) 1005 WP_001090621.1 catabolite control protein A Regulator
  EL071_RS08925 (NCTC8184_01776) - 1738270..1739355 (+) 1086 WP_000040811.1 Xaa-Pro peptidase family protein -
  EL071_RS08930 (NCTC8184_01777) - 1739413..1741203 (-) 1791 WP_115356864.1 glycoside hydrolase family 3 N-terminal domain-containing protein -
  EL071_RS08935 (NCTC8184_01778) - 1741219..1742031 (-) 813 WP_000228638.1 HAD-IA family hydrolase -
  EL071_RS08940 (NCTC8184_01779) - 1742184..1743023 (-) 840 WP_000047578.1 SDR family oxidoreductase -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36617.69 Da        Isoelectric Point: 5.7185

>NTDB_id=1119522 EL071_RS08920 WP_001090621.1 1737056..1738060(-) (ccpA) [Streptococcus agalactiae strain NCTC8184]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILARGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKAAAVDVIDILAGNHKDIAFVSGPLIDDINGKVRLAGYKEGLKKNGLNFKEGLVFEANYRYAEGFALAQRVINAG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPIAQYTRPNLTSISQPVYDLGAVSMRMLTKIMHKEELEEKEI
VLNHGIVKRGTTNN

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1119522 EL071_RS08920 WP_001090621.1 1737056..1738060(-) (ccpA) [Streptococcus agalactiae strain NCTC8184]
ATGAATACAGATGATACGATTACGATTTATGATGTTGCCCGTGAAGCAGGTGTTTCGATGGCAACTGTTAGTCGTGTGGT
AAATGGAAATAAAAATGTCAAGGAAAATACACGTAAGAAAGTCCTTGAAGTTATTGATCGTCTTGACTATCGTCCAAATG
CTGTGGCGCGTGGTTTAGCAAGTAAAAAAACGACAACTGTTGGTGTTGTCATTCCTAATATCGCAAATAGCTACTTTTCA
ATTTTAGCGCGTGGTATTGATGATATTGCAGCAATGTACAAATATAACATTGTCCTTGCTTCAAGTGATGAAGACGATGA
TAAAGAGGTTAATGTTGTTAATACTTTGTTTGCTAAGCAAGTAGACGGTATTATTTTTATGGGACACCACTTAACTGAAA
AGATTCGTGCAGAGTTCTCTCGTTCACGCACACCGATTGTTTTAGCAGGTACTGTGGATCTTGAGCATCAATTACCAAGT
GTTAATATCGATTACAAAGCAGCAGCAGTTGATGTTATTGATATTTTAGCTGGCAATCATAAAGACATTGCTTTTGTATC
AGGACCACTTATTGACGATATTAATGGCAAGGTTCGTTTGGCAGGATACAAAGAAGGTCTCAAGAAAAATGGCTTAAACT
TTAAAGAGGGGTTGGTTTTTGAAGCCAACTACCGTTATGCTGAAGGCTTTGCATTAGCTCAACGTGTGATTAATGCTGGA
GCAACAGCAGCATATGTTGCTGAGGATGAGTTAGCGGCAGGTTTGTTAAATGGTCTTTTTGAGGCAGGTAAACGTGTTCC
TGAAGATTTTGAAATTATCACAAGCAATGACTCGCCAATCGCACAATATACACGTCCTAACTTAACTTCTATCAGTCAAC
CGGTCTATGATTTGGGTGCTGTTAGCATGCGTATGCTAACAAAAATTATGCACAAAGAAGAGTTGGAAGAAAAAGAAATA
GTGCTTAATCACGGGATTGTTAAACGTGGCACAACAAATAATTAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(179-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E1EL27

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.916

99.401

0.784
  ccpA Streptococcus pneumoniae D39

77.108

99.401

0.766
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

99.102

0.569

Multiple sequence alignment