Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | EL095_RS06480 | Genome accession | NZ_LR134264 |
| Coordinates | 1385223..1386197 (+) | Length | 324 a.a. |
| NCBI ID | WP_002481040.1 | Uniprot ID | - |
| Organism | Staphylococcus simulans strain NCTC7944 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1380223..1391197
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL095_RS06450 (SAMEA3500277_01324) | - | 1381032..1381574 (+) | 543 | WP_103364380.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| EL095_RS06455 (SAMEA3500277_01325) | - | 1381587..1383044 (+) | 1458 | WP_103364379.1 | rhomboid family intramembrane serine protease | - |
| EL095_RS06460 (SAMEA3500277_01326) | - | 1383028..1383228 (+) | 201 | WP_002481044.1 | YqgQ family protein | - |
| EL095_RS06465 (SAMEA3500277_01327) | - | 1383228..1384214 (+) | 987 | WP_002481043.1 | ROK family glucokinase | - |
| EL095_RS06470 (SAMEA3500277_01328) | - | 1384214..1384543 (+) | 330 | WP_002481042.1 | MTH1187 family thiamine-binding protein | - |
| EL095_RS06475 (SAMEA3500277_01329) | - | 1384543..1385166 (+) | 624 | WP_057510470.1 | MBL fold metallo-hydrolase | - |
| EL095_RS06480 (SAMEA3500277_01330) | comGA | 1385223..1386197 (+) | 975 | WP_002481040.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EL095_RS06485 (SAMEA3500277_01331) | comGB | 1386169..1387242 (+) | 1074 | WP_103364376.1 | competence type IV pilus assembly protein ComGB | - |
| EL095_RS06490 (SAMEA3500277_01332) | comGC | 1387260..1387589 (+) | 330 | WP_002481038.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EL095_RS06495 (SAMEA3500277_01333) | comGD | 1387592..1388017 (+) | 426 | WP_002481037.1 | competence type IV pilus minor pilin ComGD | - |
| EL095_RS06500 (SAMEA3500277_01334) | comGF | 1388236..1388730 (+) | 495 | WP_002481036.1 | competence type IV pilus minor pilin ComGF | - |
| EL095_RS06505 | - | 1388895..1389434 (+) | 540 | WP_002481034.1 | shikimate kinase | - |
| EL095_RS06510 (SAMEA3500277_01337) | gcvT | 1389613..1390707 (+) | 1095 | WP_023015155.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36968.00 Da Isoelectric Point: 7.7580
>NTDB_id=1119473 EL095_RS06480 WP_002481040.1 1385223..1386197(+) (comGA) [Staphylococcus simulans strain NCTC7944]
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=1119473 EL095_RS06480 WP_002481040.1 1385223..1386197(+) (comGA) [Staphylococcus simulans strain NCTC7944]
ATGAAAAGGCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACTTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
ATGAAAAGGCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACTTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.991 |
99.691 |
0.608 |
| comGA | Staphylococcus aureus N315 |
60.991 |
99.691 |
0.608 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
38.245 |
98.457 |
0.377 |