Detailed information NTG1118764

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EL022_RS06675
• Genome accession: NZ_LR134173
• Coordinates: 1539968..1541041 (+)
• Length: 357 a.a.
• NCBI ID: WP_028381137.1
• Uniprot ID: -
• Organism: Legionella cherrii strain NCTC11976
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1534968..1546041

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL022_RS06650 (NCTC11976_01381)	-	1535175..1535930 (-)	756	WP_028381142.1	hypothetical protein	-
EL022_RS06655 (NCTC11976_01382)	rsmB	1535927..1537210 (-)	1284	WP_028381141.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
EL022_RS06660	fmt	1537210..1538152 (-)	943	Protein_1323	methionyl-tRNA formyltransferase	-
EL022_RS06665 (NCTC11976_01385)	def	1538278..1538787 (-)	510	WP_028381139.1	peptide deformylase	-
EL022_RS06670 (NCTC11976_01386)	-	1538934..1539971 (+)	1038	WP_028381138.1	LysM domain-containing protein	-
EL022_RS06675 (NCTC11976_01387)	dprA	1539968..1541041 (+)	1074	WP_028381137.1	DNA-processing protein DprA	Machinery gene
EL022_RS06680 (NCTC11976_01388)	-	1541045..1541479 (+)	435	WP_028381136.1	DUF494 family protein	-
EL022_RS06685 (NCTC11976_01389)	topA	1541611..1543896 (+)	2286	WP_028381135.1	type I DNA topoisomerase	-
EL022_RS06690 (NCTC11976_01390)	-	1543981..1544211 (-)	231	WP_028381134.1	hypothetical protein	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38860.88 Da
• Isoelectric Point: 6.7586

>NTDB_id=1118764 EL022_RS06675 WP_028381137.1 1539968..1541041(+) (dprA) [Legionella cherrii strain NCTC11976]
MNNLSYYLALNRMERVGPRTVATLQKRWPDLQQMFQLSAKELEDAGLSPTLAQTIAGFDLHLIQEDLSWLEAADTHHILT
WDSPDYPALLKEIIDPPIVLYVKGQLACLKQPKLAVVGSRNPTITGRENARQFAKAIASHGVTIVSGLALGIDAEAHEGC
LEAGGQTIAVLGTGIDRIYPYRHQSLAQKIEQVGLLMSEFPLKSPPTAGHFPRRNRIISGLSLCTLVVESAIKSGSLITA
RMALEQNRDVLAIPGSIHNPLARGCHYLLQQGAKLVTSVADVLEELRIDSEQQTTDKAILPLASGNKNLVKFIGFEMTTV
DQIILRSGCTVEQVTSELAKLELNGAVVSVPGGYMRC

Nucleotide

• Length: 1074 bp

>NTDB_id=1118764 EL022_RS06675 WP_028381137.1 1539968..1541041(+) (dprA) [Legionella cherrii strain NCTC11976]
ATGAATAATTTATCCTACTACCTCGCATTAAATCGAATGGAAAGAGTGGGGCCGCGTACGGTTGCAACATTGCAAAAACG
CTGGCCTGATCTGCAACAAATGTTCCAACTCTCAGCAAAAGAGCTTGAAGATGCGGGACTATCTCCTACTTTGGCACAAA
CCATAGCGGGTTTTGATTTGCATTTGATTCAAGAAGATCTCAGCTGGCTAGAGGCTGCTGATACGCATCATATACTGACT
TGGGATTCGCCTGACTATCCCGCCTTATTGAAGGAAATTATCGATCCTCCTATCGTTTTGTACGTTAAAGGACAGCTTGC
CTGCTTAAAACAACCTAAATTAGCTGTGGTAGGCAGCCGTAATCCAACGATAACTGGCAGAGAAAATGCCCGCCAATTTG
CAAAAGCTATCGCCTCGCATGGAGTGACCATTGTCAGTGGTTTAGCTTTAGGAATTGATGCTGAGGCTCATGAAGGATGT
TTGGAGGCCGGAGGACAGACAATAGCTGTTTTAGGGACCGGAATTGATCGGATTTATCCCTACCGACATCAGTCACTTGC
GCAAAAAATTGAGCAAGTCGGGCTATTAATGAGCGAATTTCCTCTAAAAAGTCCTCCGACTGCTGGACATTTCCCACGAA
GAAATCGTATAATAAGTGGTTTATCATTGTGCACTTTGGTTGTTGAGTCAGCAATAAAGAGTGGTTCTTTAATCACAGCA
CGAATGGCCCTGGAACAAAATCGAGATGTTTTGGCAATTCCTGGTTCCATTCATAACCCCCTGGCTCGAGGGTGTCATTA
CCTGTTGCAGCAAGGAGCTAAATTAGTCACTTCAGTTGCCGATGTTCTTGAAGAGTTGCGGATTGATTCAGAACAGCAAA
CAACTGATAAAGCGATTTTACCTCTTGCCAGCGGGAATAAAAACCTAGTAAAGTTCATTGGCTTTGAAATGACAACTGTT
GATCAGATCATTTTACGTAGTGGATGCACCGTTGAGCAAGTCACTAGTGAGCTTGCAAAATTAGAATTAAATGGGGCTGT
TGTATCTGTGCCCGGTGGCTATATGAGGTGTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-277)

• DprA winged helix domain (DprA_WH) (300-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Legionella pneumophila strain ERS1305867	73.389	100	0.734
dprA	Vibrio campbellii strain DS40M4	43.288	100	0.443
dprA	Vibrio cholerae strain A1552	42.623	100	0.437
dprA	Glaesserella parasuis strain SC1401	39.2	100	0.412