Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ELZ51_RS03445 Genome accession   NZ_LR134094
Coordinates   623003..623812 (+) Length   269 a.a.
NCBI ID   WP_115246543.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 618003..628812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS03420 (NCTC4669_00717) - 618377..619078 (-) 702 WP_126426133.1 amino acid ABC transporter permease -
  ELZ51_RS03425 (NCTC4669_00718) - 619092..619892 (-) 801 WP_126426135.1 transporter substrate-binding domain-containing protein -
  ELZ51_RS03430 (NCTC4669_00719) - 619892..620686 (-) 795 WP_003049951.1 amino acid ABC transporter ATP-binding protein -
  ELZ51_RS03435 (NCTC4669_00720) vicR 620944..621654 (+) 711 WP_003049952.1 response regulator YycF Regulator
  ELZ51_RS03440 (NCTC4669_00721) vicK 621647..622999 (+) 1353 WP_003049953.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ELZ51_RS03445 (NCTC4669_00722) vicX 623003..623812 (+) 810 WP_115246543.1 MBL fold metallo-hydrolase Regulator
  ELZ51_RS03450 (NCTC4669_00723) rnc 623911..624603 (+) 693 WP_115246542.1 ribonuclease III -
  ELZ51_RS03455 (NCTC4669_00724) smc 624604..628149 (+) 3546 WP_126426137.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30141.38 Da        Isoelectric Point: 6.0739

>NTDB_id=1118275 ELZ51_RS03445 WP_115246543.1 623003..623812(+) (vicX) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKIASLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1118275 ELZ51_RS03445 WP_115246543.1 623003..623812(+) (vicX) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCGCCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAGCATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
ATTTATGCCAACGAAAAAACATGGCAGTTGATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCTTCCCAAAAACATAT
TTTTCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGGGTTAGTCATGACGCGGTTGATCCTC
AGTTTTACCGCATCATGAAGGACAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTTAGCGACCGAATGACAGGT
ATTATCGAAAATGCGGATGGCTACTTGATTGAGTCCAATCATGACATTGAAATTTTACGCTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTATCTGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGTCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCAGTAGGTACAGACTTTACTGTTCATGATACTTCCCCGGATACGGCCTGCCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment