Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   ELZ51_RS03320 Genome accession   NZ_LR134094
Coordinates   598233..599234 (+) Length   333 a.a.
NCBI ID   WP_126426120.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 593233..604234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS03300 - 594409..595757 (+) 1349 WP_126426116.1 IS3 family transposase -
  ELZ51_RS03305 (NCTC4669_00693) - 595878..596255 (-) 378 WP_003049924.1 VOC family protein -
  ELZ51_RS03310 (NCTC4669_00694) - 596265..596930 (-) 666 WP_003049925.1 NAD(P)H-dependent oxidoreductase -
  ELZ51_RS03315 (NCTC4669_00695) - 596974..598059 (-) 1086 WP_126426118.1 M24 family metallopeptidase -
  ELZ51_RS03320 (NCTC4669_00696) ccpA 598233..599234 (+) 1002 WP_126426120.1 catabolite control protein A Regulator
  ELZ51_RS03325 (NCTC4669_00697) - 599388..600851 (+) 1464 WP_126426122.1 alpha-amylase -
  ELZ51_RS03330 (NCTC4669_00698) - 600928..601926 (+) 999 WP_126426124.1 glycosyltransferase -
  ELZ51_RS03335 (NCTC4669_00699) - 601928..603262 (+) 1335 WP_003049930.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36741.78 Da        Isoelectric Point: 5.4833

>NTDB_id=1118272 ELZ51_RS03320 WP_126426120.1 598233..599234(+) (ccpA) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVSNVVDILAENHQSIAFVSGPLIDDINGKVRLAGYKEGLKHNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEADKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1118272 ELZ51_RS03320 WP_126426120.1 598233..599234(+) (ccpA) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGAATACAGATGATACCATCACGATTTATGATGTTGCCCGTGAAGCTGGTGTTTCTATGGCAACTGTTAGTCGTGTTGT
TAATGGCAACAAAAACGTTAAGGAAAACACGCGTAAGAAAGTTTTAGAAGTCATTGACCGCCTAGATTATCGTCCAAATG
CTGTCGCACGTGGTCTCGCCAGCAAAAAAACAACAACCGTCGGGGTTGTGATTCCAAATATTGCAAACAGTTATTTTTCT
ATTTTAGCCAAAGGTATTGATGATATCGCCGCTATGTATAAATATAATATTGTACTTGCCTCTAGTGATGAGGATGATGA
CAAGGAGGTTAACGTTGTTAATACCCTCTTTGCTAAGCAAGTTGACGGTATTATCTTTATGGGGCACCATTTGACTGAAA
AAATCCGTGCGGAATTTTCACGCTCACGCACCCCGATTGTTTTAGCAGGGACAGTTGACCTTGATCATCAATTACCAAGT
GTTAATATTGACTATAAGGCAGCTGTGTCTAATGTGGTTGATATCTTGGCAGAAAACCATCAGAGCATTGCCTTTGTGTC
AGGACCACTTATTGATGACATCAATGGTAAAGTACGTTTGGCGGGGTACAAAGAAGGCTTGAAGCACAACAAACTTGACT
TCAAAGAAGGACTTGTTTTTGAAGCTAACTATTCTTATAAAGAAGGCTTTGAATTGGCACAACGTGTGATTAACTCAGGA
GCAACAGCAGCTTATGTGGCTGAAGATGAGTTAGCAGCGGGTCTTTTAAATGGTTTGTTTGAAGCAGACAAACGCGTTCC
AGAAGATTTTGAAATCATCACAAGTAATGATTCACCAGTTGTTCAATATACCCGTCCAAACTTGAGTTCTATCAGCCAAC
CCGTTTACGACTTGGGAGCTGTCAGCATGCGGATGTTGACTAAAATCATGAACAAAGAAGAATTGGAAGAAAAAGAAATT
CTTTTGAATCATGGTATTAAAAAACGCGGAACCACTAAATAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775
  ccpA Streptococcus pneumoniae D39

75.676

100

0.757
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.287

99.399

0.55

Multiple sequence alignment