Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ELZ47_RS03985 Genome accession   NZ_LR134002
Coordinates   772104..772904 (+) Length   266 a.a.
NCBI ID   WP_125331414.1    Uniprot ID   A0AAJ5TAF8
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 767104..777904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS03965 (NCTC10904_00779) - 769108..769512 (-) 405 WP_125331412.1 hypothetical protein -
  ELZ47_RS03970 - 769622..769804 (-) 183 Protein_727 amino acid ABC transporter permease -
  ELZ47_RS03975 (NCTC10904_00780) micA 770051..770752 (+) 702 WP_002894937.1 response regulator YycF Regulator
  ELZ47_RS03980 (NCTC10904_00781) micB 770745..772094 (+) 1350 WP_125331413.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ELZ47_RS03985 (NCTC10904_00782) vicX 772104..772904 (+) 801 WP_125331414.1 MBL fold metallo-hydrolase Regulator
  ELZ47_RS03990 (NCTC10904_00783) - 772996..773355 (+) 360 WP_004186130.1 YbaN family protein -
  ELZ47_RS03995 (NCTC10904_00784) rnc 773477..774175 (+) 699 WP_002903151.1 ribonuclease III -
  ELZ47_RS04000 (NCTC10904_00785) smc 774166..777702 (+) 3537 WP_126435317.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29654.55 Da        Isoelectric Point: 5.9432

>NTDB_id=1117815 ELZ47_RS03985 WP_125331414.1 772104..772904(+) (vicX) [Streptococcus sanguinis strain NCTC 10904]
MTKGFQYSILASGSSGNCFYLETDQKRILVDAGLSGKKITSLLGEIGRKPEDLDAILVTHEHKDHIHGVGVLARKYNLDI
YANEATWKAMEKDLGKLDASQKHIFELGKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIE
NADGYLIESNHDIEILRSGAYPWSLKQRILSDMGHLSNEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLA
QADMAVGHDFQVYDTSPDTATPLTSI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=1117815 ELZ47_RS03985 WP_125331414.1 772104..772904(+) (vicX) [Streptococcus sanguinis strain NCTC 10904]
ATGACTAAAGGATTTCAATACAGTATTCTGGCGTCAGGATCAAGCGGTAACTGTTTCTATCTGGAAACAGACCAAAAGCG
GATTCTGGTTGACGCTGGCTTATCAGGCAAGAAAATTACGAGCTTGCTGGGCGAAATTGGGCGCAAGCCTGAGGATTTGG
ATGCCATTTTAGTGACTCATGAGCACAAGGACCACATTCATGGTGTTGGTGTATTGGCTCGCAAGTATAATTTAGATATT
TATGCTAATGAGGCCACTTGGAAGGCTATGGAAAAGGACTTGGGCAAGCTGGATGCTAGTCAAAAGCATATCTTTGAACT
GGGCAAGACCAAGACCTTTGGAGACTTGGATGTAGAGAGCTTTGGTGTTAGTCATGACGCAGCCTGTCCACAATTTTACC
GCTTTATGAAGGATGACAAAAGCTTTGTCATGCTGACGGATACGGGCTATGTCAGTGACCGGATGGCTGGAATTATCGAA
AATGCCGATGGTTATCTGATTGAGAGCAACCATGATATTGAAATTCTTCGCAGCGGTGCCTATCCTTGGAGCCTCAAGCA
GCGAATTTTGTCGGATATGGGCCACCTGTCCAATGAAGATGGAGCAGAGACCATGATTCGGACGCTGGGCAATCGCACCA
AGCGGATCTATCTGGGCCATCTCAGTAAGGAAAACAATATCAAGGAATTGGCTCACATGACCATGGTCAATCAACTGGCT
CAAGCTGATATGGCGGTTGGCCACGACTTCCAGGTCTATGATACCTCGCCTGATACCGCGACGCCTTTGACGAGTATTTA
A

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.369

98.872

0.805

Multiple sequence alignment