Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   ELZ47_RS03935 Genome accession   NZ_LR134002
Coordinates   762046..763050 (+) Length   334 a.a.
NCBI ID   WP_004192897.1    Uniprot ID   A0AAJ5NGY5
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 757046..768050
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS03915 (NCTC10904_00768) - 757380..758408 (-) 1029 WP_126435311.1 ABC transporter substrate-binding protein -
  ELZ47_RS03920 (NCTC10904_00769) - 758464..759219 (-) 756 WP_126435312.1 ABC transporter ATP-binding protein -
  ELZ47_RS03925 (NCTC10904_00770) - 759221..760267 (-) 1047 WP_126435313.1 FecCD family ABC transporter permease -
  ELZ47_RS03930 (NCTC10904_00771) - 760801..761883 (-) 1083 WP_126435314.1 M24 family metallopeptidase -
  ELZ47_RS03935 (NCTC10904_00772) ccpA 762046..763050 (+) 1005 WP_004192897.1 catabolite control protein A Regulator
  ELZ47_RS03940 (NCTC10904_00773) - 763296..764294 (+) 999 WP_002904961.1 glycosyltransferase family 4 protein -
  ELZ47_RS03945 (NCTC10904_00774) - 764296..765618 (+) 1323 WP_002894916.1 glycosyltransferase family 4 protein -
  ELZ47_RS03950 (NCTC10904_00775) - 765690..766172 (+) 483 WP_126435315.1 hypothetical protein -
  ELZ47_RS03955 (NCTC10904_00777) - 766384..767076 (+) 693 WP_185758705.1 AAA family ATPase -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 36996.02 Da        Isoelectric Point: 6.3717

>NTDB_id=1117812 ELZ47_RS03935 WP_004192897.1 762046..763050(+) (ccpA) [Streptococcus sanguinis strain NCTC 10904]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVELLAKRNKKIAFVSGPLVDDINGKIRLSGYKDGLKNKKLSYSEGLVFESKYSYDDGYHLAERVVASK
ATAAFVTGDELAAGLLNGLSDQGIKVPEDFEIITSDDSQVARFTRPNLSTIGQPLYDIGAISMRMLTKIMHKEELEEREV
LLAHSISERKSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1117812 ELZ47_RS03935 WP_004192897.1 762046..763050(+) (ccpA) [Streptococcus sanguinis strain NCTC 10904]
ATGAACACAGACGACACAGTAACGATTTATGATGTCGCCCGTGAAGCGGGAGTTTCGATGGCGACAGTCAGTCGAGTAGT
GAATGGAAACAAGAACGTCAAAGAAAACACACGTAAAAAAGTTTTAGAGGTCATTGATCGTCTTGACTATCGTCCAAATG
CAGTAGCACGTGGACTAGCCAGCAAGAAGACTACAACCGTCGGCGTTGTCATTCCAAATATTACCAATAGCTATTTCTCA
ACCTTGGCAAAAGGGATTGACGATATTGCTGAAATGTATAAATACAATATTGTCTTGGCTAACAGTGATGAGGACGATGA
TAAGGAAGTATCCGTTGTCAATACTCTCTTTTCTAAACAGGTGGATGGCATTATTTTCATGGGCTATCATCTGACGGAGA
AAATACGCTCAGAGTTTTCACGTTCGCGCACACCGGTCGTTTTGGCGGGTACTGTCGATGTGGAGCATCAGCTTCCGAGC
GTCAATATTGACTACAAGCAAGCAACGGTTGATGCTGTAGAATTACTGGCTAAACGCAATAAGAAAATTGCCTTTGTCAG
CGGACCGCTCGTAGATGATATCAACGGGAAAATCCGTCTATCAGGCTATAAAGATGGCTTGAAGAACAAGAAACTTTCTT
ACAGCGAAGGCTTGGTTTTTGAATCTAAATATTCTTATGATGATGGCTACCACTTGGCGGAGCGTGTCGTTGCTTCCAAA
GCAACAGCAGCTTTTGTCACAGGAGATGAGTTGGCAGCAGGCCTCTTAAATGGTCTATCTGATCAAGGAATCAAGGTTCC
AGAAGATTTTGAAATCATTACCAGTGATGATTCGCAAGTAGCTCGTTTCACTCGTCCTAACCTTTCCACAATCGGTCAGC
CCCTCTATGACATTGGCGCTATCAGTATGCGCATGCTGACTAAGATTATGCATAAGGAAGAATTGGAAGAACGCGAAGTT
CTACTGGCTCACAGCATTAGCGAGCGTAAATCAACTCGGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.617

100

0.916

  ccpA Streptococcus pneumoniae D39

86.527

100

0.865

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.102

0.551


Multiple sequence alignment