Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilA1 | Type | Machinery gene |
| Locus tag | TTHNP4_RS02290 | Genome accession | NZ_LR027517 |
| Coordinates | 409637..410107 (-) | Length | 156 a.a. |
| NCBI ID | WP_124104351.1 | Uniprot ID | A0A3P4AQ07 |
| Organism | Thermus thermophilus isolate TTHNAR1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 404637..415107
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TTHNP4_RS02265 (TTHN1_00454) | comZ | 405238..406914 (-) | 1677 | WP_124104347.1 | pilus assembly PilX N-terminal domain-containing protein | Machinery gene |
| TTHNP4_RS02270 (TTHN1_00455) | pilA/pilA3 | 406925..407626 (-) | 702 | WP_124104348.1 | PilW family protein | Machinery gene |
| TTHNP4_RS02275 (TTHN1_00456) | pilA/pilA2 | 407623..408129 (-) | 507 | WP_252973319.1 | prepilin | Machinery gene |
| TTHNP4_RS14420 (TTHN1_00457) | - | 408699..408962 (+) | 264 | WP_252973320.1 | hypothetical protein | - |
| TTHNP4_RS02285 (TTHN1_00458) | - | 409108..409581 (-) | 474 | WP_124104350.1 | GspH/FimT family protein | - |
| TTHNP4_RS02290 (TTHN1_00459) | pilA/pilA1 | 409637..410107 (-) | 471 | WP_124104351.1 | GspH/FimT family protein | Machinery gene |
| TTHNP4_RS02295 (TTHN1_00460) | - | 410265..411245 (+) | 981 | WP_124104352.1 | YpdA family putative bacillithiol disulfide reductase | - |
| TTHNP4_RS02305 (TTHN1_00461) | ilvB | 411401..413089 (+) | 1689 | WP_124104353.1 | biosynthetic-type acetolactate synthase large subunit | - |
| TTHNP4_RS02310 (TTHN1_00462) | ilvN | 413086..413598 (+) | 513 | WP_011173280.1 | acetolactate synthase small subunit | - |
| TTHNP4_RS02315 (TTHN1_00463) | ilvC | 413595..414608 (+) | 1014 | WP_124104354.1 | ketol-acid reductoisomerase | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 16957.76 Da Isoelectric Point: 11.4865
>NTDB_id=1115719 TTHNP4_RS02290 WP_124104351.1 409637..410107(-) (pilA/pilA1) [Thermus thermophilus isolate TTHNAR1]
MTRRGLTLLELLLVLGILGVLLGLALPLLSPNRLALDQAARSLATQVTRARLEAIRRNAFVGLQVFTEGAGGYLLFVDQN
ANRRYDPGEEFGATRFGQGDWARVRLDPEKSALGNMPLLFDPRGIPAKPITATLALRAGEAVRKVVVSQQGRARVE
MTRRGLTLLELLLVLGILGVLLGLALPLLSPNRLALDQAARSLATQVTRARLEAIRRNAFVGLQVFTEGAGGYLLFVDQN
ANRRYDPGEEFGATRFGQGDWARVRLDPEKSALGNMPLLFDPRGIPAKPITATLALRAGEAVRKVVVSQQGRARVE
Nucleotide
Download Length: 471 bp
>NTDB_id=1115719 TTHNP4_RS02290 WP_124104351.1 409637..410107(-) (pilA/pilA1) [Thermus thermophilus isolate TTHNAR1]
ATGACTCGGCGGGGCCTTACCCTTTTGGAGCTCCTGCTGGTCTTGGGCATCCTGGGGGTCCTCCTAGGGCTGGCCCTTCC
ACTTCTTTCCCCCAACCGCCTCGCCCTGGACCAGGCCGCCCGCTCCCTCGCCACCCAGGTGACCCGGGCAAGGCTCGAGG
CCATCCGCCGGAACGCCTTCGTGGGCCTTCAGGTGTTCACCGAAGGAGCGGGGGGTTACCTGCTCTTCGTGGACCAAAAC
GCCAACCGCCGCTACGACCCCGGGGAGGAGTTCGGCGCGACCCGCTTCGGCCAAGGGGACTGGGCCCGGGTGCGCCTGGA
CCCGGAGAAGAGCGCCCTCGGCAACATGCCCCTTCTCTTTGACCCCCGGGGCATCCCGGCCAAGCCCATCACCGCCACGC
TCGCCCTGAGGGCGGGCGAGGCGGTACGGAAGGTGGTCGTCAGCCAGCAGGGCCGGGCCCGGGTGGAGTGA
ATGACTCGGCGGGGCCTTACCCTTTTGGAGCTCCTGCTGGTCTTGGGCATCCTGGGGGTCCTCCTAGGGCTGGCCCTTCC
ACTTCTTTCCCCCAACCGCCTCGCCCTGGACCAGGCCGCCCGCTCCCTCGCCACCCAGGTGACCCGGGCAAGGCTCGAGG
CCATCCGCCGGAACGCCTTCGTGGGCCTTCAGGTGTTCACCGAAGGAGCGGGGGGTTACCTGCTCTTCGTGGACCAAAAC
GCCAACCGCCGCTACGACCCCGGGGAGGAGTTCGGCGCGACCCGCTTCGGCCAAGGGGACTGGGCCCGGGTGCGCCTGGA
CCCGGAGAAGAGCGCCCTCGGCAACATGCCCCTTCTCTTTGACCCCCGGGGCATCCCGGCCAAGCCCATCACCGCCACGC
TCGCCCTGAGGGCGGGCGAGGCGGTACGGAAGGTGGTCGTCAGCCAGCAGGGCCGGGCCCGGGTGGAGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilA1 | Thermus thermophilus HB27 |
92.913 |
81.41 |
0.756 |