Detailed information NTG1115453

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BAMMD1_RS15815
• Genome accession: NZ_LN999829
• Coordinates: 3327511..3328674 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B25
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3322511..3333674

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAMMD1_RS15785 (BAMMD1_3183)	-	3322776..3323195 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
BAMMD1_RS15790 (BAMMD1_3184)	comFC	3323269..3323958 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
BAMMD1_RS15795 (BAMMD1_3185)	-	3323964..3324248 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
BAMMD1_RS15800 (BAMMD1_3186)	comFA	3324306..3325691 (-)	1386	WP_060387195.1	DEAD/DEAH box helicase	Machinery gene
BAMMD1_RS15805 (BAMMD1_3187)	-	3325799..3326647 (-)	849	WP_060387196.1	DegV family protein	-
BAMMD1_RS15810 (BAMMD1_3188)	degU	3326745..3327434 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BAMMD1_RS15815 (BAMMD1_3189)	degS	3327511..3328674 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
BAMMD1_RS15820 (BAMMD1_3190)	-	3328897..3329544 (+)	648	WP_003151384.1	YigZ family protein	-
BAMMD1_RS15825 (BAMMD1_3191)	-	3329549..3330763 (+)	1215	WP_014305930.1	LCP family protein	-
BAMMD1_RS15830 (BAMMD1_3192)	-	3330853..3331929 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
BAMMD1_RS15835 (BAMMD1_3193)	tuaH	3332062..3333258 (-)	1197	WP_060387197.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=1115453 BAMMD1_RS15815 WP_003151385.1 3327511..3328674(-) (degS) [Bacillus velezensis strain B25]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1115453 BAMMD1_RS15815 WP_003151385.1 3327511..3328674(-) (degS) [Bacillus velezensis strain B25]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAGTCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948