Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   ABR2091_RS03005 Genome accession   NZ_LN997846
Coordinates   649341..649751 (+) Length   136 a.a.
NCBI ID   WP_002067305.1    Uniprot ID   A0A333UQE7
Organism   Acinetobacter baumannii isolate R2091     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 644341..654751
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABR2091_RS02990 (ABR2091_0606) - 645330..647636 (+) 2307 WP_000259109.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  ABR2091_RS02995 (ABR2091_0607) - 647681..648454 (-) 774 WP_031966642.1 SDR family oxidoreductase -
  ABR2091_RS03000 (ABR2091_0608) mazG 648566..649372 (+) 807 WP_000359485.1 nucleoside triphosphate pyrophosphohydrolase -
  ABR2091_RS03005 (ABR2091_0609) comEA 649341..649751 (+) 411 WP_002067305.1 ComEA family DNA-binding protein Machinery gene
  ABR2091_RS03010 (ABR2091_0610) pcnB 649876..651339 (+) 1464 WP_001194201.1 polynucleotide adenylyltransferase PcnB -
  ABR2091_RS03015 (ABR2091_0611) folK 651336..651818 (+) 483 WP_000219221.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  ABR2091_RS03020 (ABR2091_0612) panB 651864..652673 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  ABR2091_RS03025 (ABR2091_0613) panC 652677..653525 (+) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  ABR2091_RS03030 (ABR2091_0614) rapZ 653548..654399 (+) 852 WP_000821671.1 RNase adapter RapZ -
  ABR2091_RS03035 (ABR2091_0615) - 654396..654665 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence


Protein


Download         Length: 136 a.a.        Molecular weight: 15668.96 Da        Isoelectric Point: 10.4475

>NTDB_id=1115344 ABR2091_RS03005 WP_002067305.1 649341..649751(+) (comEA) [Acinetobacter baumannii isolate R2091]
MQYSMRFWKNKYFLLIILCLGVISPSVYAQSFDKNFQEWKAKQQMYDQKLNISKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=1115344 ABR2091_RS03005 WP_002067305.1 649341..649751(+) (comEA) [Acinetobacter baumannii isolate R2091]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTCTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGACAAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains


Predicted by InterproScan.

(74-134)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A333UQE7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

96.324

100

0.963

  comEA Acinetobacter baumannii D1279779

95.588

100

0.956

  comEA Acinetobacter baylyi ADP1

42.748

96.324

0.412


Multiple sequence alignment