Detailed information NTG1114658

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: SABB155_RS07710
• Genome accession: NZ_LN854556
• Coordinates: 1577566..1578063 (-)
• Length: 165 a.a.
• NCBI ID: WP_077446653.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain BB155
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1572566..1583063

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SABB155_RS07685 (SABB155_14350)	gcvPB	1572728..1574200 (-)	1473	WP_000202180.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-
SABB155_RS07690 (SABB155_14360)	gcvPA	1574193..1575539 (-)	1347	WP_054190021.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
SABB155_RS07695 (SABB155_14370)	gcvT	1575559..1576650 (-)	1092	WP_054190022.1	glycine cleavage system aminomethyltransferase GcvT	-
SABB155_RS07700 (SABB155_14380)	-	1576809..1577333 (-)	525	WP_054190023.1	shikimate kinase	-
SABB155_RS07705	-	1577323..1577469 (-)	147	WP_001789879.1	hypothetical protein	-
SABB155_RS07710 (SABB155_14390)	comGF	1577566..1578063 (-)	498	WP_077446653.1	competence type IV pilus minor pilin ComGF	Machinery gene
SABB155_RS07715 (SABB155_14400)	comGE	1577981..1578280 (-)	300	WP_054190024.1	hypothetical protein	Machinery gene
SABB155_RS07720 (SABB155_14410)	comGD	1578267..1578713 (-)	447	WP_077446655.1	competence type IV pilus minor pilin ComGD	Machinery gene
SABB155_RS07725 (SABB155_14420)	comGC	1578691..1579002 (-)	312	WP_054190026.1	competence type IV pilus major pilin ComGC	Machinery gene
SABB155_RS07730 (SABB155_14430)	comGB	1579016..1580086 (-)	1071	WP_054190027.1	competence type IV pilus assembly protein ComGB	Machinery gene
SABB155_RS07735 (SABB155_14440)	comGA	1580058..1581032 (-)	975	WP_054191886.1	competence type IV pilus ATPase ComGA	Machinery gene
SABB155_RS07740 (SABB155_14450)	-	1581084..1581707 (-)	624	WP_054190028.1	MBL fold metallo-hydrolase	-
SABB155_RS07745 (SABB155_14460)	-	1581704..1582033 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
SABB155_RS07750 (SABB155_14470)	-	1582033..1583019 (-)	987	WP_000161315.1	ROK family glucokinase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19129.87 Da
• Isoelectric Point: 9.9584

>NTDB_id=1114658 SABB155_RS07710 WP_077446653.1 1577566..1578063(-) (comGF) [Staphylococcus aureus strain BB155]
MILSKVTNKFVLLQKIPLLIKRHVYSINVKAFSLVEMLVAMMVISIILLIVPDLIRLSKTFLIESRELTTVDFEFFSRDI
LEDFKGVDRNDIEIRHQRIILHKGEEMIEYKLLNNKIIKVVNDEGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=1114658 SABB155_RS07710 WP_077446653.1 1577566..1578063(-) (comGF) [Staphylococcus aureus strain BB155]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTACTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTAGTTGAAATGTTAGTAGCGATGATGGTCATAAGTATAATTTTACTAATTGTTCCAGATT
TAATTAGACTTAGTAAAACTTTTCTAATTGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAAAGGTGTAGATAGAAACGATATTGAAATTAGGCATCAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTATTGAATAATAAAATTATTAAAGTTGTAAATGACGAGGGTAATATAACAATGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

• Putative Competence protein ComGF (ComGF) (69-155)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus N315	95.758	100	0.958
comGF	Staphylococcus aureus MW2	94.545	100	0.945