Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ABBFA_RS01790 | Genome accession | NZ_CP001172 |
| Coordinates | 376639..377121 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046489.1 | Uniprot ID | A0A0J0ZLV7 |
| Organism | Acinetobacter baumannii AB307-0294 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 371639..382121
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABBFA_RS01780 (ABBFA_00345) | pilX | 371944..372762 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ABBFA_RS01785 (ABBFA_00346) | pilY1 | 372774..376628 (+) | 3855 | WP_000768943.1 | VWA domain-containing protein | Machinery gene |
| ABBFA_RS01790 (ABBFA_00347) | pilY2 | 376639..377121 (+) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| ABBFA_RS01795 (ABBFA_00348) | pilE | 377118..377543 (+) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| ABBFA_RS01800 (ABBFA_00349) | rpsP | 377690..377941 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABBFA_RS01805 (ABBFA_00350) | rimM | 377961..378509 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABBFA_RS01810 (ABBFA_00351) | trmD | 378555..379295 (+) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABBFA_RS01815 (ABBFA_00352) | rplS | 379503..379871 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABBFA_RS01820 (ABBFA_00353) | - | 379923..380864 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| ABBFA_RS01825 (ABBFA_00354) | - | 380979..382010 (-) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17657.94 Da Isoelectric Point: 8.4737
>NTDB_id=111436 ABBFA_RS01790 WP_001046489.1 376639..377121(+) (pilY2) [Acinetobacter baumannii AB307-0294]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=111436 ABBFA_RS01790 WP_001046489.1 376639..377121(+) (pilY2) [Acinetobacter baumannii AB307-0294]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
96.25 |
100 |
0.963 |
| comE | Acinetobacter baylyi ADP1 |
41.86 |
100 |
0.45 |