Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LACPI_RS11640 Genome accession   NZ_LN774769
Coordinates   2385135..2386376 (-) Length   413 a.a.
NCBI ID   WP_047916444.1    Uniprot ID   -
Organism   Lactococcus piscium MKFS47     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2380135..2391376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LACPI_RS11620 (LACPI_2277) - 2380800..2381513 (-) 714 WP_047916441.1 EcsC family protein -
  LACPI_RS11630 (LACPI_2278) - 2381901..2382455 (-) 555 WP_047916442.1 TMEM175 family protein -
  LACPI_RS11635 (LACPI_2279) - 2383110..2384963 (-) 1854 WP_047916443.1 proline--tRNA ligase -
  LACPI_RS11640 (LACPI_2280) eeP 2385135..2386376 (-) 1242 WP_047916444.1 RIP metalloprotease RseP Regulator
  LACPI_RS11645 (LACPI_2281) dxr 2386378..2387553 (-) 1176 WP_099046829.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  LACPI_RS11650 (LACPI_2282) - 2387612..2388406 (-) 795 WP_047916446.1 phosphatidate cytidylyltransferase -
  LACPI_RS11655 (LACPI_2283) - 2388403..2389152 (-) 750 WP_047916447.1 isoprenyl transferase -
  LACPI_RS11660 (LACPI_2284) yajC 2389310..2389666 (-) 357 WP_047916448.1 preprotein translocase subunit YajC -
  LACPI_RS11665 (LACPI_2285) - 2389922..2390668 (+) 747 WP_047916449.1 DUF975 family protein -
  LACPI_RS11670 (LACPI_2286) - 2390761..2391306 (-) 546 WP_047916450.1 DNA-3-methyladenine glycosylase I -

Sequence


Protein


Download         Length: 413 a.a.        Molecular weight: 45121.78 Da        Isoelectric Point: 8.3897

>NTDB_id=1114005 LACPI_RS11640 WP_047916444.1 2385135..2386376(-) (eeP) [Lactococcus piscium MKFS47]
MIQSIITFIIIFGIIVCVHEYGHLYFAKKSGILVREFSIGMGPKIYAHQAKDGTVYTIRILPLGGYVRMAGWGEDTTEIK
TGAPVSLTLDSDSMLVTRINLSDKVQFEQSLPMLVTAYDFEHALTITGEVNGQVKTYSVDHDATVVEEDGTELRIAPIDV
QYQSASLPGRMMTNFAGPLNNFILGIVACILVAFMQGSVQDLSSNKITVTDKNLPAYQAGLRTGDTVKSINGTEVSDWQS
LSDQIIKSDGKAIKVKTLKDSLVITPKKQDKAYIIGISPNLKTGFFDKVSGGVQKAATYAFTIINALKNLILHPSLNKLG
GPVAMYQMTGQAAREGLTTVIGFMALLSINLGIFNLMPIPALDGGKIVMNIIEAIRRKPMKQEHETIITLVGVGFMVLLM
IAVTWNDILRLFR

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=1114005 LACPI_RS11640 WP_047916444.1 2385135..2386376(-) (eeP) [Lactococcus piscium MKFS47]
ATGATTCAAAGTATTATTACATTTATCATCATATTTGGTATCATCGTCTGTGTACATGAGTACGGTCACTTATACTTTGC
CAAAAAATCGGGTATCCTAGTTCGCGAATTCTCGATTGGGATGGGACCAAAAATCTATGCACACCAAGCCAAAGATGGCA
CCGTCTATACGATCCGTATCTTACCACTAGGGGGCTATGTGCGTATGGCTGGCTGGGGTGAGGATACCACTGAGATTAAA
ACGGGTGCGCCTGTCAGCTTAACACTTGATTCTGACAGTATGTTGGTGACACGCATTAATCTGAGTGATAAGGTTCAATT
TGAACAGTCTCTTCCTATGTTAGTGACAGCCTATGACTTTGAGCATGCTTTAACGATTACAGGTGAAGTTAATGGTCAAG
TCAAGACATACTCAGTTGACCATGATGCGACAGTTGTCGAGGAGGATGGGACTGAGCTTCGCATCGCACCGATAGATGTC
CAATACCAAAGTGCTAGTCTACCTGGTCGGATGATGACCAACTTTGCTGGACCACTTAATAATTTTATCTTGGGGATAGT
GGCCTGTATTTTAGTGGCCTTCATGCAAGGTAGTGTCCAGGATCTATCCAGTAATAAAATCACGGTGACTGATAAAAATC
TGCCTGCTTATCAAGCAGGATTGCGTACTGGCGATACGGTTAAGTCTATCAATGGTACTGAGGTATCTGATTGGCAAAGC
CTATCTGATCAAATCATCAAGTCAGATGGTAAGGCGATTAAAGTCAAGACGCTTAAAGATAGTCTAGTCATTACGCCTAA
AAAACAAGATAAAGCCTATATTATCGGTATTTCACCTAATCTTAAGACAGGGTTCTTTGATAAGGTGAGTGGTGGTGTTC
AAAAAGCTGCTACTTATGCCTTTACAATCATTAATGCCTTGAAAAACTTAATCCTGCATCCAAGTCTCAATAAACTGGGT
GGTCCTGTTGCCATGTATCAGATGACTGGTCAAGCAGCGCGTGAAGGCTTAACAACAGTTATCGGCTTTATGGCACTCCT
ATCTATTAATTTAGGGATTTTTAACCTGATGCCAATTCCTGCGCTTGATGGTGGCAAAATTGTCATGAATATCATTGAAG
CAATCCGTCGTAAACCAATGAAACAAGAGCATGAGACGATCATTACCCTTGTCGGTGTTGGCTTCATGGTCTTACTGATG
ATCGCTGTTACCTGGAATGATATTTTGCGCTTATTTAGGTAA

Domains


Predicted by InterproScan.

(7-399)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

61.283

100

0.625

  eeP Streptococcus thermophilus LMD-9

61.045

100

0.622


Multiple sequence alignment