Detailed information
Bioinformatically predicted
Overview
| Name | sinI | Type | Regulator |
| Locus tag | VV28_RS12810 | Genome accession | NZ_LN680001 |
| Coordinates | 2570456..2570629 (+) | Length | 57 a.a. |
| NCBI ID | WP_003230187.1 | Uniprot ID | A0A063X7W9 |
| Organism | Bacillus subtilis strain BS34A | ||
| Function | inhibit the expression of sinR (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2565456..2575629
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VV28_RS12795 (BS34A_26950) | gcvT | 2566255..2567343 (-) | 1089 | WP_004398598.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| VV28_RS12800 (BS34A_26970) | hepAA | 2567785..2569458 (+) | 1674 | WP_004398544.1 | SNF2-related protein | - |
| VV28_RS12805 (BS34A_26980) | yqhG | 2569479..2570273 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| VV28_RS12810 (BS34A_26990) | sinI | 2570456..2570629 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| VV28_RS12815 (BS34A_27000) | sinR | 2570663..2570998 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| VV28_RS12820 (BS34A_27010) | tasA | 2571091..2571876 (-) | 786 | WP_004398632.1 | biofilm matrix protein TasA | - |
| VV28_RS12825 (BS34A_27020) | sipW | 2571940..2572512 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| VV28_RS12830 (BS34A_27030) | tapA | 2572496..2573257 (-) | 762 | WP_004399106.1 | amyloid fiber anchoring/assembly protein TapA | - |
| VV28_RS12835 (BS34A_27040) | yqzG | 2573529..2573855 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| VV28_RS12840 (BS34A_27050) | spoIITA | 2573897..2574076 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| VV28_RS12845 (BS34A_27060) | comGG | 2574147..2574521 (-) | 375 | WP_003230170.1 | ComG operon protein ComGG | Machinery gene |
| VV28_RS12850 (BS34A_27070) | comGF | 2574522..2574905 (-) | 384 | WP_003230168.1 | ComG operon protein ComGF | Machinery gene |
| VV28_RS12855 (BS34A_27080) | comGE | 2574931..2575278 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
Sequence
Protein
Download Length: 57 a.a. Molecular weight: 6601.52 Da Isoelectric Point: 6.7231
>NTDB_id=1113869 VV28_RS12810 WP_003230187.1 2570456..2570629(+) (sinI) [Bacillus subtilis strain BS34A]
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF
Nucleotide
Download Length: 174 bp
>NTDB_id=1113869 VV28_RS12810 WP_003230187.1 2570456..2570629(+) (sinI) [Bacillus subtilis strain BS34A]
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinI | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |