Detailed information NTG1113641

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LMI_RS01590
• Genome accession: NZ_LN614830
• Coordinates: 347906..348988 (-)
• Length: 360 a.a.
• NCBI ID: WP_045098246.1
• Uniprot ID: A0A098GB34
• Organism: Legionella micdadei strain ATCC 33218
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 342906..353988

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LMI_RS01570 (LMI_0335)	-	343874..344311 (+)	438	WP_045098242.1	hypothetical protein	-
LMI_RS01575 (LMI_0336)	-	344424..345047 (-)	624	WP_045098243.1	HAD hydrolase-like protein	-
LMI_RS01580 (LMI_0337)	topA	345176..347455 (-)	2280	WP_045098244.1	type I DNA topoisomerase	-
LMI_RS01585 (LMI_0338)	-	347485..347916 (-)	432	WP_045098245.1	DUF494 family protein	-
LMI_RS01590 (LMI_0339)	dprA	347906..348988 (-)	1083	WP_045098246.1	DNA-processing protein DprA	Machinery gene
LMI_RS01595 (LMI_0340)	def	349083..349595 (+)	513	WP_045098247.1	peptide deformylase	-
LMI_RS01600 (LMI_0341)	fmt	349592..350536 (+)	945	WP_045098248.1	methionyl-tRNA formyltransferase	-
LMI_RS01605 (LMI_0342)	rsmB	350533..351813 (+)	1281	WP_045098249.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
LMI_RS01610 (LMI_0343)	-	351857..352603 (+)	747	WP_045098250.1	CPBP family glutamic-type intramembrane protease	-
LMI_RS01615 (LMI_0344)	-	352692..353201 (+)	510	WP_045098251.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 39640.66 Da
• Isoelectric Point: 6.7529

>NTDB_id=1113641 LMI_RS01590 WP_045098246.1 347906..348988(-) (dprA) [Legionella micdadei strain ATCC 33218]
MDNKYYLLALNRIQQIGPRTILKLLTYWPKLEEMFRLTSEQLQTAGLTPQLAESICQFDFSEVDVDLRWEEETNHHLLTW
DDPNYPLLLKEIHDPPPVLYLQGNASSLHQASIAIVGSRKPSITGAETAKRFSFELALSQLTVISGLALGIDAQAHQGCI
EANGLTIAILGTGIDCVYPRQHGQLAQKICEKGLLVSEFPLKVGPKAGHFPRRNRIISGLALATLVVEATIRSGSLITAR
LALEQNRDVLAIPGSIYNPQARGCHHLLQQGAKLVTSSQEVIEELGLDNLVIKQSNTTQSLARDNKNLVKCIGFEITTVD
QIVRRSSLSVEEVACGLATLEIQGIIKAVPGGYMRCSYER

Nucleotide

• Length: 1083 bp

>NTDB_id=1113641 LMI_RS01590 WP_045098246.1 347906..348988(-) (dprA) [Legionella micdadei strain ATCC 33218]
ATGGATAACAAATATTATTTGCTCGCCCTTAACAGAATCCAACAAATCGGCCCAAGGACAATTCTAAAGCTGCTAACCTA
TTGGCCTAAGCTCGAAGAAATGTTTCGATTAACCTCCGAGCAATTGCAAACAGCCGGACTCACACCACAACTTGCCGAGT
CAATTTGCCAGTTTGATTTTAGCGAAGTCGATGTAGATTTACGTTGGGAAGAAGAAACCAATCACCATTTATTGACTTGG
GATGATCCTAATTACCCGTTGTTACTTAAAGAAATTCATGATCCGCCACCTGTTTTGTATTTACAAGGCAACGCTTCAAG
CCTCCATCAAGCGTCAATTGCGATTGTCGGTAGTCGTAAACCATCAATAACTGGTGCAGAAACCGCTAAGCGTTTTTCTT
TTGAATTAGCTTTAAGCCAACTAACGGTTATCAGCGGCCTCGCTTTAGGCATCGATGCCCAAGCTCATCAAGGATGCATA
GAGGCTAATGGTCTAACCATCGCCATTTTAGGAACAGGAATCGACTGCGTTTACCCACGACAACATGGCCAACTCGCACA
AAAAATTTGCGAGAAAGGTTTATTGGTGAGTGAATTTCCCTTAAAGGTAGGTCCCAAAGCTGGACATTTCCCTCGTAGAA
ATCGTATAATAAGCGGTTTGGCATTAGCTACGTTAGTGGTTGAAGCAACCATTCGGAGCGGCTCATTGATTACAGCGCGC
CTCGCTTTGGAACAAAATCGCGACGTATTAGCCATACCAGGCTCTATTTACAACCCGCAAGCGCGCGGCTGTCATCATCT
ACTGCAACAAGGAGCAAAATTAGTTACATCAAGTCAAGAAGTAATTGAAGAGCTAGGACTGGATAACCTAGTTATAAAGC
AAAGTAATACGACGCAATCCCTTGCCAGAGATAACAAAAACCTAGTAAAGTGCATTGGCTTTGAAATTACGACTGTTGAT
CAAATTGTTAGGCGAAGCAGTTTAAGTGTTGAAGAGGTAGCTTGTGGTCTAGCCACACTGGAAATACAGGGTATCATTAA
AGCCGTACCCGGGGGTTATATGAGGTGTTCATATGAAAGATAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (72-276)

• DprA winged helix domain (DprA_WH) (297-352)

3D structure

• AlphaFold DB: A0A098GB34

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Legionella pneumophila strain ERS1305867	60.111	100	0.603
dprA	Vibrio campbellii strain DS40M4	46.809	91.389	0.428
dprA	Vibrio cholerae strain A1552	42.5	100	0.425
dprA	Glaesserella parasuis strain SC1401	40.489	100	0.414