Detailed information NTG0111341

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: BN1079_RS08470
• Genome accession: NZ_CCSF01000001
• Coordinates: 1818221..1819813 (+)
• Length: 530 a.a.
• NCBI ID: WP_052114456.1
• Uniprot ID: A0A078LT74
• Organism: Pseudomonas saudiphocaensis strain 20_BN
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1813221..1824813

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BN1079_RS08450 (BN1079_01730)	pgeF	1814923..1815660 (-)	738	WP_037023657.1	peptidoglycan editing factor PgeF	-
BN1079_RS08455 (BN1079_01731)	rluD	1815657..1816631 (-)	975	WP_037023659.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
BN1079_RS08460 (BN1079_01732)	-	1816917..1817915 (+)	999	WP_037023661.1	outer membrane protein assembly factor BamD	-
BN1079_RS08465 (BN1079_01733)	-	1817995..1818231 (+)	237	WP_037023664.1	PP0621 family protein	-
BN1079_RS08470 (BN1079_01734)	pilS	1818221..1819813 (+)	1593	WP_052114456.1	sensor histidine kinase	Regulator
BN1079_RS08475 (BN1079_01735)	pilR	1820014..1821354 (+)	1341	WP_037023667.1	sigma-54-dependent transcriptional regulator	Regulator
BN1079_RS08480 (BN1079_01736)	-	1821431..1822480 (-)	1050	WP_037023670.1	DUF2333 family protein	-
BN1079_RS08485 (BN1079_01737)	-	1822692..1824302 (+)	1611	WP_037023672.1	response regulator	-

Sequence

Protein

• Length: 530 a.a.
• Molecular weight: 58818.97 Da
• Isoelectric Point: 8.0972

>NTDB_id=111341 BN1079_RS08470 WP_052114456.1 1818221..1819813(+) (pilS) [Pseudomonas saudiphocaensis strain 20_BN]
MNAKSPVFLGQQGRRILRLYHLYRVAIGLVLVLLISSGLHSDLMRMVNPTAFHYGAWGYLILNTLIAVLLQNPRRELSVM
ILALTDVSLLSALFYFAGGTPSGIGNLLIIAVAIANILLRGRIGFLIAAVAATGLIYLTFYLSLNNSEAGTQYVQAAALG
TLCFAAALLVQGLTRRLQVSETLARQRAEEVANLEALNAQILQRMRTGILVLDPQQRILLANQGALDMLDQHSLVGERLA
PRCPALIDALRQWRENPTLRPQQFKATPNGAMLQPSFAALQHGVRQDTLVFLEDISQIAQQAQQLKLASLGRLTASIAHE
IRNPLGAISHAAQLLQESEELDAADLRLTQIIQDHSRRMNLVIENVLQLSRRRQAEPQLLDLKYWVHRFASEFRSSLPAH
QSVHVKTLGSSLQTRMDPNQLIQVLTNLVQNGLRYSGQEHPEAQVWLHLFRDEASDLPVLEVLDDGPGVPAEQVQNIFEP
FFTTENKGTGLGLYICRELCESNQARLDYRTRDEGGSCFRIVFAHPGKLA

Nucleotide

• Length: 1593 bp

>NTDB_id=111341 BN1079_RS08470 WP_052114456.1 1818221..1819813(+) (pilS) [Pseudomonas saudiphocaensis strain 20_BN]
GTGAACGCTAAAAGCCCAGTGTTTCTAGGCCAGCAGGGACGGCGGATTCTTCGCCTCTATCACCTGTATCGCGTCGCCAT
CGGTCTGGTTCTGGTACTGCTGATCAGCAGCGGCCTGCACAGCGACCTGATGCGCATGGTCAACCCCACGGCGTTCCACT
ATGGCGCCTGGGGCTACCTGATTCTCAACACGCTCATTGCCGTTCTGCTGCAGAACCCCAGGCGCGAGTTGTCCGTCATG
ATCCTCGCACTGACGGATGTGTCACTGCTCTCTGCGCTGTTCTACTTCGCTGGAGGTACCCCCAGCGGCATCGGCAACCT
GCTGATCATTGCCGTCGCCATCGCCAATATCCTGCTGCGCGGACGCATCGGCTTCCTCATCGCCGCAGTTGCCGCCACCG
GCCTCATCTACCTGACCTTCTACCTCAGCCTGAACAACAGCGAAGCCGGCACCCAGTACGTGCAAGCGGCGGCACTCGGC
ACCCTGTGTTTCGCCGCCGCGCTGCTGGTGCAGGGCCTCACGCGCCGCCTGCAGGTCAGTGAGACCCTGGCTCGGCAGCG
CGCCGAGGAAGTCGCCAACCTCGAAGCCTTGAACGCCCAGATCCTGCAGCGCATGCGCACCGGCATCCTGGTGCTCGATC
CGCAGCAGCGCATCCTGCTCGCCAATCAGGGAGCTCTGGACATGCTCGATCAGCACTCTCTGGTCGGCGAGCGACTGGCG
CCGCGCTGCCCGGCGCTGATCGACGCTCTACGTCAATGGCGCGAGAACCCGACACTGCGCCCACAGCAATTCAAGGCCAC
GCCAAATGGCGCCATGCTGCAACCCAGTTTCGCCGCCCTGCAGCATGGGGTACGCCAGGACACCCTGGTTTTTCTCGAAG
ATATTTCGCAAATCGCGCAACAGGCTCAGCAGCTCAAGCTGGCCTCCCTCGGTCGATTGACGGCCAGCATCGCCCATGAA
ATTCGTAACCCGCTCGGCGCCATCAGCCACGCCGCGCAACTGCTGCAAGAGTCCGAAGAGCTGGATGCTGCCGACCTGCG
CCTGACGCAGATCATCCAGGACCATTCCCGGCGGATGAATCTGGTGATCGAGAACGTCCTGCAGTTGTCGCGCCGGCGAC
AGGCCGAGCCGCAGCTGTTGGACCTCAAATATTGGGTACATCGTTTCGCCAGCGAGTTTCGCTCCAGCCTGCCCGCTCAC
CAGAGCGTTCATGTAAAAACCCTGGGCAGCTCGCTGCAGACGCGCATGGACCCGAACCAGCTGATCCAGGTCCTGACCAA
CCTGGTGCAGAACGGTCTGCGCTACAGCGGCCAGGAACACCCCGAGGCCCAGGTCTGGTTGCACCTTTTTCGCGACGAAG
CCAGCGACCTGCCAGTGCTCGAAGTGCTCGATGACGGTCCCGGCGTTCCTGCCGAACAAGTGCAGAACATTTTTGAGCCC
TTCTTCACCACCGAGAACAAGGGCACAGGGCTAGGCCTGTACATCTGCCGAGAACTCTGTGAAAGCAACCAGGCGCGTTT
GGACTATCGCACCAGGGACGAGGGCGGCAGCTGTTTTCGTATCGTCTTCGCCCATCCGGGCAAGCTGGCCTGA

Domains

Predicted by InterproScan.

• PAS domain (PAS_8) (201-251)

• His Kinase A (phospho-acceptor) domain (HisKA) (309-373)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (417-523)

3D structure

• AlphaFold DB: A0A078LT74

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	66.154	98.113	0.649