Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   HMPREF9318_RS10670 Genome accession   NZ_KB373319
Coordinates   547247..548248 (+) Length   333 a.a.
NCBI ID   WP_006739678.1    Uniprot ID   G5KIC9
Organism   Streptococcus urinalis FB127-CNA-2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 542247..553248
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9318_RS10650 (HMPREF9318_02130) - 543385..544143 (-) 759 WP_006738609.1 GntR family transcriptional regulator -
  HMPREF9318_RS10655 (HMPREF9318_02131) udp 544309..545088 (+) 780 WP_006738821.1 uridine phosphorylase -
  HMPREF9318_RS10660 (HMPREF9318_02132) - 545111..546313 (+) 1203 WP_006740491.1 NupC/NupG family nucleoside CNT transporter -
  HMPREF9318_RS10665 (HMPREF9318_02133) deoC 546342..547013 (+) 672 WP_006740241.1 deoxyribose-phosphate aldolase -
  HMPREF9318_RS10670 (HMPREF9318_02134) ccpA 547247..548248 (+) 1002 WP_006739678.1 catabolite control protein A Regulator
  HMPREF9318_RS10675 (HMPREF9318_02135) - 548286..549737 (+) 1452 WP_006738919.1 alpha-amylase -
  HMPREF9318_RS10680 (HMPREF9318_02136) - 549825..550823 (+) 999 WP_006738463.1 glycosyltransferase -
  HMPREF9318_RS10685 (HMPREF9318_02137) - 550825..552162 (+) 1338 WP_006739752.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36855.11 Da        Isoelectric Point: 5.7694

>NTDB_id=1113401 HMPREF9318_RS10670 WP_006739678.1 547247..548248(+) (ccpA) [Streptococcus urinalis FB127-CNA-2]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNIANNYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKAAVIDVVNILAENHKQIAYISGPLIDDINGKVRLVGYKEGLKQNKLDFKEGLVFEANYSYKEGFDLAQRVINSG
ATAAYVAEDELAAGLLNGLFELGKKVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1113401 HMPREF9318_RS10670 WP_006739678.1 547247..548248(+) (ccpA) [Streptococcus urinalis FB127-CNA-2]
ATGAATACTGATGACACTATCACGATATATGATGTTGCCCGTGAAGCTGGTGTTTCAATGGCAACCGTTAGTCGCGTTGT
CAATGGCAATAAAAATGTAAAGGAAAATACACGAAAAAAAGTTCTTGAAGTAATTGAACGTTTAGACTATAGACCAAATG
CAGTTGCGCGTGGACTAGCAAGTAAGAAGACAACGACTGTTGGTGTTGTTATTCCAAATATCGCTAATAACTATTTTTCA
ATCTTAGCTAAAGGAATTGACGATATCGCTGCAATGTACAAATACAACATTGTTTTAGCTTCAAGTGATGAAGATGATGA
CAAAGAAGTCAATGTTGTCAATACACTGTTTGCAAAGCAAGTAGATGGTATCATTTTTATGGGACACCATTTAACTGAAA
AAATTCGTGCTGAATTTTCCCGCTCAAGAACACCAATTGTCTTAGCTGGTACTGTTGACTTAGAACATCAACTGCCAAGT
GTAAATATTGATTACAAAGCAGCAGTCATTGACGTGGTTAATATTTTAGCTGAAAACCATAAGCAAATTGCTTATATTTC
AGGACCATTAATTGACGATATCAATGGTAAAGTTCGCCTCGTTGGCTACAAAGAAGGACTAAAGCAAAATAAATTAGACT
TCAAAGAAGGCCTTGTTTTTGAAGCTAATTATAGCTATAAAGAAGGTTTTGATTTAGCTCAACGTGTTATTAATTCAGGG
GCAACAGCAGCTTATGTTGCTGAAGATGAATTGGCGGCTGGACTTTTAAATGGCTTATTTGAATTAGGCAAAAAAGTTCC
TGAAGATTTTGAAATCATTACAAGTAATGATTCACCAGTTGTTCAGTACACAAGGCCTAACTTATCTTCTATCAGTCAAC
CTGTTTATGATTTAGGAGCTGTCAGCATGCGCATGCTAACTAAAATCATGAATAAAGAAGAGCTAGAAGAAAAAGAAATA
TTACTCAACCATGGTATCAAAAAACGTGGTACAACTAAGTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5KIC9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.276

100

0.763
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.798

99.399

0.565

Multiple sequence alignment