Detailed information
Bioinformatically predicted
Overview
| Name | crp | Type | Regulator |
| Locus tag | KHN94_RS13530 | Genome accession | NZ_HG992758 |
| Coordinates | 2969508..2970140 (+) | Length | 210 a.a. |
| NCBI ID | WP_005381432.1 | Uniprot ID | U2ZZI4 |
| Organism | Vibrio sp. B1FLJ16 isolate B1REV17 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2964508..2975140
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KHN94_RS13510 (ACOMICROBIO_EPCKBFOG_02758) | - | 2966180..2966668 (+) | 489 | WP_182011639.1 | TIGR02444 family protein | - |
| KHN94_RS13515 (ACOMICROBIO_EPCKBFOG_02759) | - | 2966754..2967760 (+) | 1007 | Protein_2609 | hydrolase | - |
| KHN94_RS13520 (ACOMICROBIO_EPCKBFOG_02760) | - | 2967794..2968006 (+) | 213 | WP_182011637.1 | YheU family protein | - |
| KHN94_RS13525 (ACOMICROBIO_LOCUS1937) | - | 2968398..2969267 (+) | 870 | WP_182011636.1 | phosphoribulokinase | - |
| KHN94_RS13530 (ACOMICROBIO_LOCUS1938) | crp | 2969508..2970140 (+) | 633 | WP_005381432.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| KHN94_RS13535 (ACOMICROBIO_EPCKBFOG_02763) | - | 2970457..2971248 (-) | 792 | WP_182032434.1 | DUF1338 domain-containing protein | - |
| KHN94_RS13540 (ACOMICROBIO_LOCUS1939) | astD | 2971372..2972829 (-) | 1458 | WP_182032433.1 | succinylglutamate-semialdehyde dehydrogenase | - |
| KHN94_RS13545 (ACOMICROBIO_LOCUS1940) | astA | 2972858..2973877 (-) | 1020 | WP_182011633.1 | arginine N-succinyltransferase | - |
Sequence
Protein
Download Length: 210 a.a. Molecular weight: 23665.48 Da Isoelectric Point: 7.8388
>NTDB_id=1112544 KHN94_RS13530 WP_005381432.1 2969508..2970140(+) (crp) [Vibrio sp. B1FLJ16 isolate B1REV17]
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEED
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQMARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEED
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQMARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
Nucleotide
Download Length: 633 bp
>NTDB_id=1112544 KHN94_RS13530 WP_005381432.1 2969508..2970140(+) (crp) [Vibrio sp. B1FLJ16 isolate B1REV17]
ATGGTTCTAGGTAAACCTCAAACCGACCCAACATTAGAGTGGTTTCTTTCACACTGTCATATTCATAAGTACCCATCAAA
GAGCACGCTAATTCACGCGGGCGAAAAAGCTGAAACGTTGTACTACATCGTTAAAGGTTCTGTTGCGGTTCTTATCAAAG
ACGAAGAAGGTAAGGAGATGATCCTTTCTTACCTAAACCAAGGTGACTTTATTGGTGAACTTGGTCTATTCGAGGAAGAC
CAAGAGCGTACAGCTTGGGTTCGAGCTAAATCTCCTTGTGAAGTTGCTGAAATTTCTTTCAAGAAATTCCGTCAGCTTAT
CCAAGTAAACCCAGACATCCTGATGCGTCTTTCTGCGCAGATGGCTCGTCGCCTTCAGGTAACCAGCCAAAAAGTGGGTG
ACCTAGCGTTCCTAGACGTAACTGGTCGTATCGCTCAGACGCTTCTGAACCTTGCAAAACAACCAGACGCGATGACTCAC
CCAGATGGCATGCAAATCAAGATCACTCGTCAGGAAATCGGTCAAATCGTTGGCTGTTCTCGTGAGACAGTAGGCCGTAT
CTTGAAGATGCTGGAAGAGCAGAACCTGATCTCTGCGCACGGTAAAACTATCGTTGTTTACGGTACTCGTTAA
ATGGTTCTAGGTAAACCTCAAACCGACCCAACATTAGAGTGGTTTCTTTCACACTGTCATATTCATAAGTACCCATCAAA
GAGCACGCTAATTCACGCGGGCGAAAAAGCTGAAACGTTGTACTACATCGTTAAAGGTTCTGTTGCGGTTCTTATCAAAG
ACGAAGAAGGTAAGGAGATGATCCTTTCTTACCTAAACCAAGGTGACTTTATTGGTGAACTTGGTCTATTCGAGGAAGAC
CAAGAGCGTACAGCTTGGGTTCGAGCTAAATCTCCTTGTGAAGTTGCTGAAATTTCTTTCAAGAAATTCCGTCAGCTTAT
CCAAGTAAACCCAGACATCCTGATGCGTCTTTCTGCGCAGATGGCTCGTCGCCTTCAGGTAACCAGCCAAAAAGTGGGTG
ACCTAGCGTTCCTAGACGTAACTGGTCGTATCGCTCAGACGCTTCTGAACCTTGCAAAACAACCAGACGCGATGACTCAC
CCAGATGGCATGCAAATCAAGATCACTCGTCAGGAAATCGGTCAAATCGTTGGCTGTTCTCGTGAGACAGTAGGCCGTAT
CTTGAAGATGCTGGAAGAGCAGAACCTGATCTCTGCGCACGGTAAAACTATCGTTGTTTACGGTACTCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| crp | Vibrio cholerae strain A1552 |
98.095 |
100 |
0.981 |
| crp | Haemophilus influenzae Rd KW20 |
75.49 |
97.143 |
0.733 |
| crp | Acinetobacter baumannii D1279779 |
47.826 |
98.571 |
0.471 |