Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   HMPREF9425_RS04220 Genome accession   NZ_GL831112
Coordinates   852781..853593 (+) Length   270 a.a.
NCBI ID   WP_037621682.1    Uniprot ID   A0A3E4X993
Organism   Streptococcus vestibularis ATCC 49124     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 847781..858593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9425_RS04195 - 848080..848196 (-) 117 Protein_848 amino acid ABC transporter permease -
  HMPREF9425_RS04200 (HMPREF9425_0876) - 849106..849778 (-) 673 WP_003097031.1 transporter substrate-binding domain-containing protein -
  HMPREF9425_RS04205 (HMPREF9425_0877) - 849788..850412 (-) 625 WP_003097033.1 amino acid ABC transporter ATP-binding protein -
  HMPREF9425_RS04210 (HMPREF9425_0878) vicR 850735..851442 (+) 708 WP_003093060.1 response regulator YycF Regulator
  HMPREF9425_RS04215 (HMPREF9425_0879) vicK 851435..852775 (+) 1341 WP_003097035.1 cell wall metabolism sensor histidine kinase VicK Regulator
  HMPREF9425_RS04220 (HMPREF9425_0880) vicX 852781..853593 (+) 813 WP_037621682.1 MBL fold metallo-hydrolase Regulator
  HMPREF9425_RS04225 (HMPREF9425_0881) - 853654..854013 (+) 360 WP_003097039.1 YbaN family protein -
  HMPREF9425_RS04230 (HMPREF9425_0882) - 854068..855282 (-) 1215 WP_003097042.1 aminoacyltransferase -
  HMPREF9425_RS04235 (HMPREF9425_0883) yidA 855284..856093 (-) 810 WP_003097045.1 sugar-phosphatase -
  HMPREF9425_RS04240 (HMPREF9425_0884) - 856271..857134 (+) 864 WP_003097048.1 GNAT family N-acetyltransferase -
  HMPREF9425_RS04245 (HMPREF9425_0885) - 857209..857595 (+) 387 WP_002884910.1 DUF1934 domain-containing protein -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30078.94 Da        Isoelectric Point: 5.3499

>NTDB_id=1111746 HMPREF9425_RS04220 WP_037621682.1 852781..853593(+) (vicX) [Streptococcus vestibularis ATCC 49124]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKVDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRSIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVFDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=1111746 HMPREF9425_RS04220 WP_037621682.1 852781..853593(+) (vicX) [Streptococcus vestibularis ATCC 49124]
ATGACCTCAGATTTAGGGTTTAAATACAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGA
AAAGAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAGATTACAAGTTTGCTAGCAGAGATTGATCGTGATCCAAGTG
ATCTTGATGCCATCTTAGTAACGCATGAGCACAAGGATCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGTATG
GATATCTACGCGAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTGGGTAAGGTTGATAATAGTCAGAAACA
TGTTTTTTCTCGCGATAAGCTTCTAACTTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTGATC
CACAATTTTACCGTTTTATGAAAGATGGGAAGAGTTTTGTCATGTTGACGGATACGGGTTATGTGTCTGATCGCATGGCA
GGTATTATTGAGAATGCTGATGGTTATCTGATTGAGTCCAATCATGATATTGAAATCCTTAGGGCAGGTTCTTATCCTTG
GTCAACTAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTAGCATTG
GTAATAAAACTAAAAAGATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACCATGGAA
AATCAGTTGGCTCGAGCTGACTTTGGTGTTGGAACTGACTTTAAGGTTTTTGATACCTCACCAGACACGGCGACCCCACT
AACAGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-202)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3E4X993

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.493

99.259

0.759

Multiple sequence alignment