Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   HMPREF9425_RS00070 Genome accession   NZ_GL831112
Coordinates   15974..16741 (-) Length   255 a.a.
NCBI ID   WP_003095245.1    Uniprot ID   -
Organism   Streptococcus vestibularis ATCC 49124     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 10974..21741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9425_RS00050 (HMPREF9425_0011) ychF 11509..12624 (-) 1116 WP_003095721.1 redox-regulated ATPase YchF -
  HMPREF9425_RS00055 (HMPREF9425_0012) - 12835..13026 (-) 192 WP_002886272.1 DUF951 domain-containing protein -
  HMPREF9425_RS00060 (HMPREF9425_0013) dnaN 13078..14214 (-) 1137 WP_003095723.1 DNA polymerase III subunit beta -
  HMPREF9425_RS00065 (HMPREF9425_0014) dnaA 14369..15733 (-) 1365 WP_003095243.1 chromosomal replication initiator protein DnaA -
  HMPREF9425_RS00070 (HMPREF9425_0015) spo0J 15974..16741 (-) 768 WP_003095245.1 ParB/RepB/Spo0J family partition protein Regulator
  HMPREF9425_RS00075 (HMPREF9425_0016) htrA 16807..18042 (-) 1236 WP_003095726.1 S1C family serine protease Regulator
  HMPREF9425_RS00080 (HMPREF9425_0017) rlmH 18236..18715 (+) 480 WP_037621613.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HMPREF9425_RS00085 - 18731..19413 (+) 683 Protein_17 YoaK family protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29428.89 Da        Isoelectric Point: 9.6540

>NTDB_id=1111716 HMPREF9425_RS00070 WP_003095245.1 15974..16741(-) (spo0J) [Streptococcus vestibularis ATCC 49124]
MSEQLKTLPISEIYPNPFQPRLEFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
KVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELAYSHEELAKAMGKSRPYISNTLRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKTHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1111716 HMPREF9425_RS00070 WP_003095245.1 15974..16741(-) (spo0J) [Streptococcus vestibularis ATCC 49124]
ATGTCAGAACAACTCAAAACTTTACCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAGAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAGTCAATATCAGAAAATGGTTTAATACAACCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGTGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
AAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGATCAAATCTCAATCCTATCGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAGCTTACAGTCACGAGGAGCTCGCTAAAGCTATGGGGAAATCTAGACCAT
ATATTAGTAACACTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAAGAACTTCCTAGAAAACAAAAATCTAAAAAAGATATCCATATAAAAGATAAAG
AAAAAGAACTTGAAAAATCACTAGGTCTTCCCGTAACTCTACGTTATCACAAAACTCACTCGGGAACGATTCAAATACAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58

Multiple sequence alignment