Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   ACN076_RS04065 Genome accession   NZ_CP184836
Coordinates   835380..837338 (+) Length   652 a.a.
NCBI ID   WP_084926838.1    Uniprot ID   A0A1X1KB03
Organism   Streptococcus sp. K0074     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 830380..842338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS04040 (ACN076_04040) - 830515..831027 (+) 513 WP_004257120.1 YiiX/YebB-like N1pC/P60 family cysteine hydrolase -
  ACN076_RS04045 (ACN076_04045) - 831011..831661 (+) 651 WP_261060661.1 DUF1803 domain-containing protein -
  ACN076_RS04050 (ACN076_04050) - 831762..831953 (+) 192 WP_000051182.1 CsbD family protein -
  ACN076_RS04055 (ACN076_04055) - 832002..833447 (-) 1446 WP_261078621.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase -
  ACN076_RS04060 (ACN076_04060) - 833553..835175 (+) 1623 WP_261060659.1 polysaccharide biosynthesis protein -
  ACN076_RS04065 (ACN076_04065) amiA 835380..837338 (+) 1959 WP_084926838.1 peptide ABC transporter substrate-binding protein Regulator
  ACN076_RS04070 (ACN076_04070) - 837640..838095 (+) 456 WP_084926839.1 hypothetical protein -
  ACN076_RS04075 (ACN076_04075) - 838260..839354 (+) 1095 WP_020902227.1 cystathionine gamma-synthase -
  ACN076_RS04080 (ACN076_04080) - 839362..840528 (+) 1167 WP_237447403.1 MalY/PatB family protein -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72598.98 Da        Isoelectric Point: 4.9557

>NTDB_id=1111449 ACN076_RS04065 WP_084926838.1 835380..837338(+) (amiA) [Streptococcus sp. K0074]
MKKSKAKYAALAGVVLSAGILLSACGSSSTGSKTYNYVYTSDPSSLNYLAENRATTNDIVVNLVDGLMENDQYGNYIPSL
AEDWSVSKDGLTYTYKLRKDAKWYTADGEEYAPVTAQDFVTGLKYAADKKSEALYLVQESVAGLDDYINGKTSDFSTVGV
KALDDQTVQYTLTRPESYWNSKTTSTILFPVNADFLKSKGDDFGKVDPSSILYNGPFLMKSFVSKSVIEFKKNPNYWDAK
NVFVDDVKLAYYDGSDQDALARNFVEGAYSYARLYPNSSSFEGIKEKNKDNIIYSLQDATSYFLNFNLDRKSYKFTSKTS
DAEKKSTQEAVLNKNFRQAINFAYDRTAYGAQSQGEDGATKILRNLVVPPNFVSINGKDFGEVVASKMVNYGKEWQGINF
ADAQDPYYNAEKAKAKFAEAKKELQAKGVQFPIHLDMTVDQAAKKGVQEANSMKQSIEAALGADNVVIDIQQLSTEDYDS
TSYLAQTAAQKDYDLYNGGWGSDYQDPSTYLDIFNVKSGGVLQNLGIEPGESNDKAKAVGLDIYTQMLEEANKEQDLAKR
YEKYAEIQAWLVDSALAIPNISKGGTPVLRKTVPFSEPYSLAGNKGIESYKYLKVQDKTVTKDEYEKAKEKWLKEKEESN
KKAQEELAKHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=1111449 ACN076_RS04065 WP_084926838.1 835380..837338(+) (amiA) [Streptococcus sp. K0074]
ATGAAAAAGTCTAAAGCCAAGTATGCAGCACTTGCAGGTGTCGTGTTAAGTGCAGGTATTTTATTAAGCGCGTGTGGAAG
TTCTAGCACAGGGTCAAAAACATATAACTATGTTTATACCAGTGATCCGTCTAGTTTGAATTATCTAGCAGAAAACCGTG
CAACGACCAATGATATCGTGGTTAATTTGGTAGATGGGCTCATGGAAAATGACCAGTATGGAAACTATATTCCATCTTTG
GCAGAGGATTGGAGTGTTTCTAAGGACGGTTTGACCTATACATACAAACTGCGGAAAGATGCGAAATGGTATACTGCAGA
TGGGGAAGAATATGCTCCTGTAACTGCCCAAGATTTTGTAACTGGTTTGAAATATGCGGCTGATAAAAAATCAGAAGCCT
TGTACTTGGTGCAAGAATCCGTTGCTGGTTTGGATGATTACATTAACGGTAAAACAAGCGACTTTTCAACTGTCGGAGTC
AAGGCTCTTGATGACCAAACTGTTCAATATACCTTGACACGACCAGAATCTTACTGGAACTCAAAAACAACCTCAACCAT
TCTCTTCCCAGTCAATGCGGATTTCTTGAAATCAAAAGGGGATGATTTTGGGAAGGTAGACCCATCTAGTATTTTGTACA
ATGGACCTTTCTTGATGAAATCCTTTGTTTCAAAATCTGTCATTGAATTCAAGAAAAATCCGAACTACTGGGATGCTAAA
AATGTCTTTGTAGATGATGTGAAATTGGCCTATTATGATGGTAGTGACCAAGATGCACTGGCTCGTAACTTTGTAGAAGG
TGCTTATAGCTATGCTCGTCTTTATCCAAATAGTTCAAGTTTTGAAGGAATTAAAGAAAAGAATAAGGACAATATCATCT
ATAGCTTGCAAGATGCTACTTCTTACTTCTTAAACTTTAACCTAGATAGAAAATCTTATAAATTCACTTCAAAAACAAGT
GATGCTGAGAAGAAATCGACTCAAGAAGCGGTTCTTAACAAAAACTTCCGTCAAGCCATCAACTTTGCATATGATCGTAC
AGCTTACGGGGCTCAATCTCAAGGAGAAGATGGTGCAACTAAGATTTTGCGTAACTTGGTTGTTCCTCCAAACTTTGTAA
GTATCAACGGAAAAGACTTTGGTGAAGTAGTAGCCTCTAAGATGGTCAATTATGGTAAGGAATGGCAAGGAATCAACTTT
GCGGATGCCCAAGATCCATACTACAATGCTGAAAAAGCCAAGGCTAAATTTGCAGAGGCTAAGAAAGAACTCCAAGCTAA
AGGAGTTCAATTCCCTATCCACTTGGACATGACAGTTGACCAAGCTGCTAAAAAGGGTGTCCAAGAGGCAAATTCTATGA
AACAATCTATTGAAGCAGCCTTAGGTGCAGATAATGTTGTAATTGATATTCAACAACTCTCCACTGAAGACTATGATAGT
ACAAGCTATCTGGCTCAAACTGCTGCTCAGAAAGATTATGATCTTTACAACGGTGGTTGGGGATCTGACTATCAAGATCC
ATCAACTTATCTTGATATTTTCAATGTGAAGAGCGGTGGAGTGTTGCAAAATCTGGGTATAGAGCCTGGTGAATCTAATG
ATAAGGCTAAGGCTGTTGGACTGGATATCTACACTCAAATGCTGGAAGAAGCCAATAAGGAGCAAGATCTTGCAAAACGC
TATGAAAAGTATGCTGAGATCCAAGCATGGTTGGTAGATAGCGCTTTAGCGATTCCAAATATTTCTAAGGGGGGAACACC
AGTATTGAGAAAAACAGTTCCTTTCTCAGAACCATATTCATTAGCTGGTAATAAAGGAATCGAATCCTATAAATACCTCA
AAGTACAAGATAAAACAGTCACAAAAGATGAATATGAAAAAGCTAAAGAAAAATGGCTGAAAGAAAAAGAAGAATCCAAT
AAAAAAGCTCAAGAAGAATTGGCAAAACATGTCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1KB03

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

57.903

100

0.584
  amiA3 Streptococcus thermophilus LMG 18311

56.601

100

0.572
  amiA3 Streptococcus thermophilus LMD-9

56.449

100

0.571

Multiple sequence alignment