Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   ACN076_RS03070 Genome accession   NZ_CP184836
Coordinates   615986..617965 (+) Length   659 a.a.
NCBI ID   WP_101785382.1    Uniprot ID   -
Organism   Streptococcus sp. K0074     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 610986..622965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS03050 (ACN076_03050) - 612418..612627 (+) 210 Protein_569 dTDP-glucose 4,6-dehydratase -
  ACN076_RS03055 (ACN076_03055) rfbD 612708..613559 (+) 852 WP_033680692.1 dTDP-4-dehydrorhamnose reductase -
  ACN076_RS03060 (ACN076_03060) - 613968..614606 (+) 639 WP_033680690.1 DUF1919 domain-containing protein -
  ACN076_RS03065 (ACN076_03065) glf 614682..615785 (+) 1104 WP_101785384.1 UDP-galactopyranose mutase -
  ACN076_RS03070 (ACN076_03070) amiA3 615986..617965 (+) 1980 WP_101785382.1 peptide ABC transporter substrate-binding protein Regulator
  ACN076_RS03075 (ACN076_03075) pbp1a 618173..620338 (-) 2166 WP_101785381.1 penicillin-binding protein PBP1A -
  ACN076_RS03080 (ACN076_03080) recU 620331..620930 (-) 600 WP_420790099.1 Holliday junction resolvase RecU -
  ACN076_RS03085 (ACN076_03085) - 620997..621524 (+) 528 WP_031227950.1 DUF1273 domain-containing protein -
  ACN076_RS03090 (ACN076_03090) gpsB 621594..621923 (+) 330 WP_420790100.1 cell division regulator GpsB -

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 72905.45 Da        Isoelectric Point: 4.7039

>NTDB_id=1111440 ACN076_RS03070 WP_101785382.1 615986..617965(+) (amiA3) [Streptococcus sp. K0074]
MKTRKVLALAGVTLLAAGVLAACSGGSATKGEQTFAFTYETDPDNLNYLTTSKAATSNITSNVIDGLLENDRYGNLIPSM
AEDWSVSKDGLTYTYKIRQDAKWYTAEGEEYAPVKAQDFVTGLKYATDKKSQALYLVQDSIKGLDAYAKGETTDFAQVGI
KALDDQTVQYTLNKPETFWNSKTTMGVLAPVNEEFLNSKGDDFAKATDPSSILYNGPYLLKSLVAKSSVEFAKNPNYWDK
DNVHVDKIKLSFWDGQDTSKPAENFKDGSFTAARLYPTSASFAELEKSMKDNIVYTQQDSTTYLVGTNIDRQSYKYTSKT
SDEQKTSTKKALLNKDFRQAIAFGFDRTAYASQVNGASGASKILRNLFVPPTFVQADGKNFGDMVKEKLVTYGEEWKDVN
LADAQDGLYNPEKAKAEFAKAKSALQAEGVTFPIHLDMPVDQTATTKVQRVQSFKQSVEETLGTDNVVIDIQQLQKDEVL
NITYFAETAAGEDWDISDNVGWSPDFADPSTYLDIIKPSVGENTKTYLGFDSGTDNAAAKTVGLNDYEKLVTEAGNETTD
VVKRYDKYATAQAWLTDSALIIPTTTLTGRPILSKMVPFTMPFAFSGNKGTSDPLLYKYLELQDKAVTVDEYQKAQDKWM
KEKEESNKKAQEDLAKHVK

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=1111440 ACN076_RS03070 WP_101785382.1 615986..617965(+) (amiA3) [Streptococcus sp. K0074]
ATGAAAACAAGAAAAGTATTGGCTCTTGCGGGAGTCACTTTATTAGCAGCGGGTGTCTTAGCGGCTTGTTCTGGTGGTTC
AGCTACTAAAGGTGAGCAGACCTTTGCATTTACCTACGAGACAGATCCAGATAATCTTAACTATTTAACAACCAGTAAGG
CAGCTACTTCAAACATTACTAGTAATGTCATTGATGGATTACTTGAAAATGACCGCTATGGGAATCTTATTCCCTCTATG
GCAGAAGACTGGTCAGTTTCTAAGGATGGCTTGACTTATACTTATAAGATTCGTCAGGATGCCAAGTGGTATACTGCAGA
AGGTGAAGAGTATGCTCCTGTTAAGGCACAGGACTTTGTGACAGGTCTTAAATATGCAACAGATAAGAAATCACAAGCCC
TTTACTTGGTACAAGATTCAATCAAAGGTCTAGATGCCTATGCAAAAGGTGAGACCACAGACTTTGCTCAAGTCGGGATT
AAAGCCCTTGACGATCAAACAGTCCAATACACCTTGAACAAACCTGAAACTTTTTGGAATTCTAAAACAACTATGGGTGT
ACTTGCGCCAGTCAATGAAGAGTTTTTGAACTCAAAAGGGGATGATTTTGCCAAAGCTACGGATCCAAGCAGTATCTTGT
ATAATGGTCCTTATTTGTTAAAATCTCTTGTGGCTAAATCTTCCGTTGAATTTGCGAAAAATCCTAACTACTGGGATAAG
GACAATGTTCATGTTGACAAGATTAAATTGTCATTCTGGGATGGTCAAGATACCAGCAAACCAGCAGAAAACTTTAAGGA
TGGAAGCTTTACAGCAGCTCGTCTCTATCCAACAAGTGCAAGTTTCGCAGAGCTTGAGAAGAGTATGAAAGACAATATTG
TCTATACTCAACAAGACTCGACTACGTATCTAGTAGGAACAAATATTGATCGTCAGTCCTATAAATATACTTCTAAGACT
AGCGACGAACAAAAGACATCTACTAAAAAGGCTCTCTTAAACAAGGATTTCCGTCAGGCTATTGCCTTTGGTTTTGATCG
TACAGCATATGCTTCACAAGTGAACGGTGCCAGTGGTGCAAGCAAAATCTTGCGTAATCTCTTTGTGCCACCAACATTTG
TTCAAGCAGATGGGAAAAACTTTGGCGATATGGTCAAAGAAAAATTAGTAACCTATGGGGAAGAATGGAAGGATGTTAAT
CTGGCTGATGCACAAGATGGTCTCTACAATCCAGAAAAAGCCAAGGCCGAATTTGCCAAGGCTAAGTCAGCTTTACAGGC
AGAAGGCGTGACCTTCCCAATTCATTTGGATATGCCAGTTGACCAGACAGCAACTACAAAAGTTCAACGTGTTCAATCTT
TCAAACAATCGGTTGAAGAAACCTTGGGTACAGATAATGTCGTAATTGATATTCAACAACTACAAAAAGATGAAGTCTTG
AATATTACCTACTTTGCTGAAACAGCAGCTGGGGAAGATTGGGATATTTCAGATAATGTTGGTTGGTCTCCAGACTTTGC
GGATCCATCAACTTATCTCGATATTATCAAACCATCAGTTGGTGAAAACACTAAAACCTACCTTGGCTTCGATTCTGGTA
CAGATAATGCTGCAGCTAAAACTGTAGGTCTAAACGACTATGAGAAATTAGTAACTGAAGCTGGAAATGAGACAACAGAT
GTAGTAAAACGATATGATAAATATGCTACAGCCCAAGCTTGGTTGACAGATAGTGCCTTGATTATCCCAACAACAACACT
TACTGGTCGCCCAATTTTGTCTAAGATGGTACCATTTACGATGCCGTTTGCCTTCTCTGGTAACAAGGGGACAAGTGATC
CACTCCTATACAAATACTTGGAACTTCAAGATAAGGCAGTCACTGTAGATGAATACCAAAAAGCCCAAGATAAATGGATG
AAAGAAAAAGAAGAATCCAATAAAAAAGCGCAAGAAGACCTTGCAAAACATGTAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

58.788

100

0.589
  amiA Streptococcus salivarius strain HSISS4

58.788

100

0.589
  amiA3 Streptococcus thermophilus LMG 18311

58.182

100

0.583

Multiple sequence alignment