Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACNR9V_RS06230 | Genome accession | NZ_CP184786 |
| Coordinates | 1177184..1178248 (+) | Length | 354 a.a. |
| NCBI ID | WP_420768886.1 | Uniprot ID | - |
| Organism | Parageobacillus thermoglucosidasius strain W-36 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1172184..1183248
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNR9V_RS06200 (ACNR9V_06200) | - | 1172834..1173145 (+) | 312 | WP_003249171.1 | MTH1187 family thiamine-binding protein | - |
| ACNR9V_RS06205 (ACNR9V_06205) | - | 1173178..1173354 (-) | 177 | WP_013400388.1 | DUF2759 domain-containing protein | - |
| ACNR9V_RS06210 (ACNR9V_06210) | - | 1173691..1174323 (+) | 633 | WP_003249173.1 | MBL fold metallo-hydrolase | - |
| ACNR9V_RS06215 (ACNR9V_06215) | - | 1174657..1175790 (+) | 1134 | WP_013400389.1 | class I SAM-dependent methyltransferase | - |
| ACNR9V_RS06220 (ACNR9V_06220) | - | 1175841..1176083 (-) | 243 | WP_003249178.1 | DUF2626 family protein | - |
| ACNR9V_RS06225 (ACNR9V_06225) | - | 1176284..1176982 (-) | 699 | WP_125009481.1 | helix-turn-helix transcriptional regulator | - |
| ACNR9V_RS06230 (ACNR9V_06230) | comGA | 1177184..1178248 (+) | 1065 | WP_420768886.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACNR9V_RS06235 (ACNR9V_06235) | comGB | 1178241..1179272 (+) | 1032 | WP_125009483.1 | competence type IV pilus assembly protein ComGB | - |
| ACNR9V_RS06240 (ACNR9V_06240) | comGC | 1179285..1179581 (+) | 297 | WP_125009484.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACNR9V_RS06245 (ACNR9V_06245) | comGD | 1179565..1180008 (+) | 444 | WP_003249186.1 | competence type IV pilus minor pilin ComGD | - |
| ACNR9V_RS06250 (ACNR9V_06250) | comGE | 1179992..1180315 (+) | 324 | WP_125009485.1 | competence type IV pilus minor pilin ComGE | - |
| ACNR9V_RS06255 (ACNR9V_06255) | comGF | 1180312..1180737 (+) | 426 | WP_125009486.1 | competence type IV pilus minor pilin ComGF | - |
| ACNR9V_RS06260 (ACNR9V_06260) | comGG | 1180754..1181143 (+) | 390 | WP_125009487.1 | competence type IV pilus minor pilin ComGG | - |
| ACNR9V_RS06265 (ACNR9V_06265) | - | 1181210..1181344 (+) | 135 | WP_420768887.1 | hypothetical protein | - |
| ACNR9V_RS06270 (ACNR9V_06270) | - | 1181411..1181590 (+) | 180 | WP_003249195.1 | YqzE family protein | - |
| ACNR9V_RS06275 (ACNR9V_06275) | - | 1181648..1182439 (-) | 792 | WP_125009488.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 354 a.a. Molecular weight: 39867.32 Da Isoelectric Point: 8.9637
>NTDB_id=1111290 ACNR9V_RS06230 WP_420768886.1 1177184..1178248(+) (comGA) [Parageobacillus thermoglucosidasius strain W-36]
MNEIEYLADRLIKEASVLRVSDIHIVPRKDDAAVRFRLDGLLMEKEVLTKEICDRLITHFKFLAGMDIGERRRPQSGAME
TKQQGEIIHLRLSTLPTSYDESLVIRLLPQNLFLPLSQLSLFANAAKTLLSLFQQPQGLIIFTGPAGSGKTTTLYTLLHV
CQSKWNRNVITLEDPVEKRIDNILQVQINERAGITYANGLKAALRHDPNIIMIGEIRDAETAKIAVRSSMTGHLIASTMH
TKNAVGAIYRLREFGIPLHDIEQTLLAVTAQRLVDLVCPFCGEHCSPFCRKHRHIRRAAVHELLYGDALSDAIQSVQNGR
KTYRYYTLQNVIRKGVALGFLPPRLLCAKEGENE
MNEIEYLADRLIKEASVLRVSDIHIVPRKDDAAVRFRLDGLLMEKEVLTKEICDRLITHFKFLAGMDIGERRRPQSGAME
TKQQGEIIHLRLSTLPTSYDESLVIRLLPQNLFLPLSQLSLFANAAKTLLSLFQQPQGLIIFTGPAGSGKTTTLYTLLHV
CQSKWNRNVITLEDPVEKRIDNILQVQINERAGITYANGLKAALRHDPNIIMIGEIRDAETAKIAVRSSMTGHLIASTMH
TKNAVGAIYRLREFGIPLHDIEQTLLAVTAQRLVDLVCPFCGEHCSPFCRKHRHIRRAAVHELLYGDALSDAIQSVQNGR
KTYRYYTLQNVIRKGVALGFLPPRLLCAKEGENE
Nucleotide
Download Length: 1065 bp
>NTDB_id=1111290 ACNR9V_RS06230 WP_420768886.1 1177184..1178248(+) (comGA) [Parageobacillus thermoglucosidasius strain W-36]
ATGAATGAAATCGAATATCTTGCCGATCGTCTCATCAAAGAAGCAAGTGTGCTTCGTGTGTCTGACATTCACATCGTTCC
GCGCAAAGACGATGCAGCAGTGCGTTTCCGGCTTGATGGATTGCTTATGGAAAAAGAAGTGCTCACAAAAGAAATATGCG
ATCGCCTGATAACCCATTTTAAGTTTTTAGCCGGAATGGACATTGGCGAACGCCGCCGGCCGCAAAGCGGGGCGATGGAA
ACAAAGCAGCAAGGGGAAATTATTCACTTGCGCCTTTCCACACTGCCGACATCTTACGATGAAAGCCTCGTCATTCGGCT
TCTTCCCCAAAATTTGTTTCTTCCTCTTTCACAGCTTTCTTTATTTGCCAATGCCGCAAAAACATTGCTTTCCCTTTTTC
AGCAACCTCAAGGGTTAATTATTTTCACAGGACCAGCCGGGTCAGGAAAGACGACGACATTGTACACGTTGCTGCACGTC
TGCCAGTCCAAATGGAACCGCAATGTCATCACATTAGAGGATCCTGTTGAAAAGCGAATCGACAATATATTGCAAGTGCA
AATCAATGAGAGAGCAGGCATCACATATGCAAACGGCTTAAAAGCAGCTTTGCGGCACGATCCAAACATTATTATGATCG
GCGAAATCCGGGATGCCGAAACGGCAAAAATCGCGGTACGTTCGTCGATGACAGGACATTTGATTGCGTCGACAATGCAT
ACGAAAAACGCGGTGGGAGCGATTTACCGTTTGCGTGAATTTGGGATTCCGCTTCATGATATTGAGCAAACGCTGCTTGC
CGTGACAGCGCAGCGGCTTGTCGACTTAGTATGCCCGTTTTGCGGCGAACATTGCTCGCCATTTTGCCGCAAACATCGCC
ACATTCGCCGCGCCGCCGTTCATGAGCTGTTGTATGGAGATGCGCTGTCTGACGCAATTCAATCCGTGCAAAACGGAAGA
AAAACGTATCGTTACTATACGCTGCAAAACGTGATTCGAAAAGGGGTTGCTCTCGGATTTTTGCCGCCGCGCCTTCTTTG
CGCCAAGGAGGGAGAAAATGAATAA
ATGAATGAAATCGAATATCTTGCCGATCGTCTCATCAAAGAAGCAAGTGTGCTTCGTGTGTCTGACATTCACATCGTTCC
GCGCAAAGACGATGCAGCAGTGCGTTTCCGGCTTGATGGATTGCTTATGGAAAAAGAAGTGCTCACAAAAGAAATATGCG
ATCGCCTGATAACCCATTTTAAGTTTTTAGCCGGAATGGACATTGGCGAACGCCGCCGGCCGCAAAGCGGGGCGATGGAA
ACAAAGCAGCAAGGGGAAATTATTCACTTGCGCCTTTCCACACTGCCGACATCTTACGATGAAAGCCTCGTCATTCGGCT
TCTTCCCCAAAATTTGTTTCTTCCTCTTTCACAGCTTTCTTTATTTGCCAATGCCGCAAAAACATTGCTTTCCCTTTTTC
AGCAACCTCAAGGGTTAATTATTTTCACAGGACCAGCCGGGTCAGGAAAGACGACGACATTGTACACGTTGCTGCACGTC
TGCCAGTCCAAATGGAACCGCAATGTCATCACATTAGAGGATCCTGTTGAAAAGCGAATCGACAATATATTGCAAGTGCA
AATCAATGAGAGAGCAGGCATCACATATGCAAACGGCTTAAAAGCAGCTTTGCGGCACGATCCAAACATTATTATGATCG
GCGAAATCCGGGATGCCGAAACGGCAAAAATCGCGGTACGTTCGTCGATGACAGGACATTTGATTGCGTCGACAATGCAT
ACGAAAAACGCGGTGGGAGCGATTTACCGTTTGCGTGAATTTGGGATTCCGCTTCATGATATTGAGCAAACGCTGCTTGC
CGTGACAGCGCAGCGGCTTGTCGACTTAGTATGCCCGTTTTGCGGCGAACATTGCTCGCCATTTTGCCGCAAACATCGCC
ACATTCGCCGCGCCGCCGTTCATGAGCTGTTGTATGGAGATGCGCTGTCTGACGCAATTCAATCCGTGCAAAACGGAAGA
AAAACGTATCGTTACTATACGCTGCAAAACGTGATTCGAAAAGGGGTTGCTCTCGGATTTTTGCCGCCGCGCCTTCTTTG
CGCCAAGGAGGGAGAAAATGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
55.848 |
96.61 |
0.54 |
| pilB | Haemophilus influenzae 86-028NP |
41.25 |
90.395 |
0.373 |
| pilB | Glaesserella parasuis strain SC1401 |
42.105 |
85.876 |
0.362 |